Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List


UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL093W
Length:
220
Number of sequences:
5887
Description:
YNL093W YPT53 SGDID:S000005037, Chr XIV from 449868-450530, Genome Release 64-1-1, Verified ORF, "Rab family GTPase, similar to Ypt51p and Ypt52p and to mammalian rab5; required for vacuolar protein sorting and endocytosis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q8R527    205   RHOQ_MOUSE Rho-related GTP-binding protein Rh...1950.000000000000003     75.1     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0045121; C:membrane raft; IDA:BHF-UCL.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; TAS:MGI.
GO:0030866; P:cortical actin cytoskeleton organization; IMP:BHF-UCL.::GO:0090005; P:negative regulation of establishment of protein localization in plasma membrane; IDA:BHF-UCL.::GO:0046325; P:negative regulation of glucose import; IC:BHF-UCL.::GO:0008360; P:regulation of cell shape; IDA:MGI.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
662O42277    188   RASK_ORYLA GTPase KRas OS=Oryzias latipes (Me...1560.000000000000003     74.7     29     50GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
663P17081    205   RHOQ_HUMAN Rho-related GTP-binding protein Rh...1960.000000000000003     75.1     27     45GO:0005884; C:actin filament; IDA:BHF-UCL.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005886; C:plasma membrane; IDA:BHF-UCL.
GO:0032427; F:GBD domain binding; IPI:BHF-UCL.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IDA:BHF-UCL.::GO:0005522; F:profilin binding; IPI:BHF-UCL.
GO:0030866; P:cortical actin cytoskeleton organization; IMP:BHF-UCL.::GO:0008286; P:insulin receptor signaling pathway; IMP:BHF-UCL.::GO:0090005; P:negative regulation of establishment of protein localization in plasma membrane; IMP:BHF-UCL.::GO:0051491; P:positive regulation of filopodium assembly; IDA:BHF-UCL.::GO:0046326; P:positive regulation of glucose import; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0032956; P:regulation of actin cytoskeleton organization; IC:BHF-UCL.::GO:0051056; P:regulation of small GTPase mediated signal transduction; TAS:Reactome.::GO:0007264; P:small GTPase mediated signal transduction; TAS:Reactome.
664P08644    189   RASK_RAT GTPase KRas OS=Rattus norvegicus (Ra...1520.000000000000003     74.7     30     50GO:0045121; C:membrane raft; IDA:RGD.::GO:0005739; C:mitochondrion; IDA:RGD.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0019003; F:GDP binding; IDA:RGD.::GO:0019002; F:GMP binding; IDA:RGD.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0030275; F:LRR domain binding; IDA:RGD.
GO:0019221; P:cytokine-mediated signaling pathway; IMP:RGD.::GO:0043406; P:positive regulation of MAP kinase activity; IMP:RGD.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IMP:RGD.::GO:0051000; P:positive regulation of nitric-oxide synthase activity; IMP:RGD.::GO:0051384; P:response to glucocorticoid stimulus; IEP:RGD.::GO:0051385; P:response to mineralocorticoid stimulus; IEP:RGD.::GO:0035176; P:social behavior; IEP:RGD.
665P32883    189   RASK_MOUSE GTPase KRas OS=Mus musculus (Mouse...1520.000000000000003     74.7     30     50GO:0005624; C:membrane fraction; IDA:MGI.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IGI:MGI.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0030036; P:actin cytoskeleton organization; IGI:MGI.::GO:0008284; P:positive regulation of cell proliferation; IGI:MGI.::GO:0035022; P:positive regulation of Rac protein signal transduction; IGI:MGI.::GO:0007265; P:Ras protein signal transduction; IGI:MGI.::GO:0048169; P:regulation of long-term neuronal synaptic plasticity; IGI:MGI.::GO:0032228; P:regulation of synaptic transmission, GABAergic; IGI:MGI.::GO:0051146; P:striated muscle cell differentiation; IGI:MGI.::GO:0008542; P:visual learning; IGI:MGI.
666Q96A58    199   RERG_HUMAN Ras-related and estrogen-regulated...1710.000000000000004     74.7     32     54GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0016020; C:membrane; IEA:InterPro.::GO:0005634; C:nucleus; IDA:HPA.
GO:0030331; F:estrogen receptor binding; NAS:UniProtKB.::GO:0019003; F:GDP binding; TAS:UniProtKB.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0030308; P:negative regulation of cell growth; IDA:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:0009725; P:response to hormone stimulus; IDA:UniProtKB.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
667P87027    198   SPG1_SCHPO Septum-promoting GTP-binding prote...1700.000000000000004     74.7     28     48GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005525; F:GTP binding; IC:PomBase.::GO:0003924; F:GTPase activity; TAS:PomBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0071937; P:barrier septum assembly involved in cell cycle cytokinesis; IMP:PomBase.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0031028; P:septation initiation signaling cascade; IGI:PomBase.
668Q8R367    199   RERG_MOUSE Ras-related and estrogen-regulated...1710.000000000000004     74.7     32     54GO:0016020; C:membrane; IEA:InterPro.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
669P51539    194   RAS1_HYDVU Ras-like protein RAS1 OS=Hydra vul...1620.000000000000004     74.3     30     52GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
670Q0VCJ7    199   RERG_BOVIN Ras-related and estrogen-regulated...1710.000000000000004     74.3     32     54GO:0016020; C:membrane; IEA:InterPro.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
671D3Z8L7    218   RRAS_RAT Ras-related protein R-Ras OS=Rattus ...1520.000000000000004     74.7     33     51GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
672O88931    192   RAC2_CAVPO Ras-related C3 botulinum toxin sub...1840.000000000000005     74.3     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
673P70426    219   RIT1_MOUSE GTP-binding protein Rit1 OS=Mus mu...1630.000000000000005     74.3     29     50GO:0005886; C:plasma membrane; IDA:MGI.
GO:0005525; F:GTP binding; IDA:MGI.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
674Q8J212    208   RHO1_KLULA GTP-binding protein Rho1 OS=1267 /...1850.000000000000006     74.3     26     50GO:0005622; C:intracellular; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
675Q874R1    203   RHO4_SCHPO GTP-binding protein rho4 OS=Schizo...1730.000000000000006     73.9     31     48GO:0000935; C:barrier septum; IDA:PomBase.::GO:0005938; C:cell cortex; IDA:PomBase.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IC:PomBase.::GO:0003924; F:GTPase activity; TAS:PomBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0031505; P:fungal-type cell wall organization; TAS:PomBase.::GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0030994; P:primary cell septum disassembly; TAS:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:PomBase.::GO:0032955; P:regulation of barrier septum assembly; IMP:PomBase.::GO:0008360; P:regulation of cell shape; IMP:PomBase.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
676P34144    194   RAC1A_DICDI Rho-related protein rac1A OS=Dict...1900.000000000000006     73.9     27     48GO:0045335; C:phagocytic vesicle; IDA:dictyBase.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0019901; F:protein kinase binding; IPI:dictyBase.
GO:0030838; P:positive regulation of actin filament polymerization; IDA:dictyBase.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
677Q91806    189   RASN_XENLA GTPase NRas OS=Xenopus laevis (Afr...1560.000000000000006     73.9     29     49GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
678Q92963    219   RIT1_HUMAN GTP-binding protein Rit1 OS=Homo s...1650.000000000000006     74.3     31     50GO:0005886; C:plasma membrane; TAS:ProtInc.
GO:0005516; F:calmodulin binding; TAS:ProtInc.::GO:0005525; F:GTP binding; TAS:ProtInc.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0007264; P:small GTPase mediated signal transduction; TAS:Reactome.
679P34145    194   RAC1B_DICDI Rho-related protein rac1B OS=Dict...1700.000000000000006     73.9     28     49GO:0005622; C:intracellular; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0019901; F:protein kinase binding; IPI:dictyBase.
GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043326; P:chemotaxis to folate; TAS:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0006897; P:endocytosis; IMP:dictyBase.::GO:0030838; P:positive regulation of actin filament polymerization; IDA:dictyBase.::GO:0008360; P:regulation of cell shape; IMP:dictyBase.::GO:0019953; P:sexual reproduction; IEP:dictyBase.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
680P34146    193   RAC1C_DICDI Rho-related protein rac1C OS=Dict...1700.000000000000008     73.6     29     49GO:0005622; C:intracellular; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0019901; F:protein kinase binding; IPI:dictyBase.
GO:0019953; P:sexual reproduction; IEP:dictyBase.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
681Q5F352    189   RASN_CHICK GTPase NRas OS=Gallus gallus (Chic...1520.000000000000009     73.6     30     49GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
682P06781    192   RHO2_YEAST GTP-binding protein RHO2 OS=Saccha...1670.000000000000009     73.6     32     48GO:0005622; C:intracellular; TAS:SGD.::GO:0005624; C:membrane fraction; IDA:SGD.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IDA:SGD.::GO:0004871; F:signal transducer activity; TAS:SGD.
GO:0007015; P:actin filament organization; TAS:SGD.::GO:0030010; P:establishment of cell polarity; TAS:SGD.::GO:0031505; P:fungal-type cell wall organization; TAS:SGD.::GO:0007017; P:microtubule-based process; TAS:SGD.::GO:0007264; P:small GTPase mediated signal transduction; TAS:SGD.
683O94363    185   RHB1_SCHPO GTP-binding protein rhb1 OS=Schizo...1680.00000000000001     73.2     30     52GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0019003; F:GDP binding; IDA:PomBase.::GO:0005525; F:GTP binding; IDA:UniProtKB.::GO:0003924; F:GTPase activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0030996; P:cell cycle arrest in response to nitrogen starvation; IMP:PomBase.::GO:0010963; P:regulation of L-arginine import; IGI:PomBase.::GO:0007264; P:small GTPase mediated signal transduction; IC:PomBase.
684P32253    189   RASC_DICDI Ras-like protein rasC OS=Dictyoste...1760.00000000000001     73.2     28     51GO:0005622; C:intracellular; IC:dictyBase.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0031982; C:vesicle; IDA:dictyBase.
GO:0005525; F:GTP binding; IDA:dictyBase.::GO:0003924; F:GTPase activity; IDA:dictyBase.
GO:0030036; P:actin cytoskeleton organization; IMP:dictyBase.::GO:0007190; P:activation of adenylate cyclase activity; IGI:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0008283; P:cell proliferation; IGI:dictyBase.::GO:0006928; P:cellular component movement; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0043326; P:chemotaxis to folate; IMP:dictyBase.::GO:0007163; P:establishment or maintenance of cell polarity; IMP:dictyBase.::GO:0007188; P:G-protein signaling, coupled to cAMP nucleotide second messenger; IMP:dictyBase.::GO:0031276; P:negative regulation of lateral pseudopodium assembly; IMP:dictyBase.::GO:0030828; P:positive regulation of cGMP biosynthetic process; IMP:dictyBase.::GO:0051491; P:positive regulation of filopodium assembly; IMP:dictyBase.::GO:0031284; P:positive regulation of guanylate cyclase activity; IMP:dictyBase.::GO:0043406; P:positive regulation of MAP kinase activity; IMP:dictyBase.::GO:0051897; P:positive regulation of protein kinase B signaling cascade; IMP:dictyBase.::GO:0043491; P:protein kinase B signaling cascade; IMP:dictyBase.::GO:0007265; P:Ras protein signal transduction; IDA:dictyBase.::GO:0001558; P:regulation of cell growth; IMP:dictyBase.
685Q07983    188   RASK_MONDO GTPase KRas OS=Monodelphis domesti...1520.00000000000001     72.8     30     50GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
686Q09914    202   RHO1_SCHPO GTP-binding protein rho1 OS=Schizo...1700.00000000000001     72.8     29     51GO:0000935; C:barrier septum; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031234; C:extrinsic to internal side of plasma membrane; NAS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0030427; C:site of polarized growth; TAS:PomBase.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; TAS:PomBase.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0030950; P:establishment or maintenance of actin cytoskeleton polarity; IMP:PomBase.::GO:0060583; P:regulation of actin cortical patch localization; IGI:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:PomBase.::GO:0032949; P:regulation of alpha-glucan biosynthetic process; IMP:PomBase.::GO:0032955; P:regulation of barrier septum assembly; IMP:PomBase.::GO:0090334; P:regulation of cell wall (1->3)-beta-D-glucan biosynthetic process; TAS:PomBase.::GO:0030100; P:regulation of endocytosis; ISS:PomBase.::GO:0032878; P:regulation of establishment or maintenance of cell polarity; IMP:PomBase.::GO:0007266; P:Rho protein signal transduction; TAS:PomBase.
687P18262    178   RAS_ARTSA Ras-like protein OS=Artemia salina ...1760.00000000000002     72.4     27     48GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
688Q5RD87    189   RASN_PONAB GTPase NRas OS=Pongo abelii (Sumat...1520.00000000000002     72     29     49GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
689Q86L51    205   RAPB_DICDI Ras-related protein rapB OS=Dictyo...1660.00000000000003     72     27     55GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
690Q54HZ7    189   RACM_DICDI Rho-related protein racM OS=Dictyo...1240.00000000000003     71.6     35     56GO:0005622; C:intracellular; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
691P38976    192   RAS2_HYDVU Ras-like protein RAS2 OS=Hydra vul...1520.00000000000003     71.6     34     51GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 1000 661 - 690
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::