Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL081C
Length:
143
Number of sequences:
5887
Description:
YNL081C SWS2 SGDID:S000005025, Chr XIV from 476619-476188, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841P62272    152   RS18_PIG 40S ribosomal protein S18 OS=Sus scr...383.6     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; ISS:AgBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
842P62270    152   RS18_MOUSE 40S ribosomal protein S18 OS=Mus m...383.6     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; IBA:RefGenome.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IBA:RefGenome.::GO:0006412; P:translation; IEA:InterPro.
843P62269    152   RS18_HUMAN 40S ribosomal protein S18 OS=Homo ...383.6     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0042254; P:ribosome biogenesis; IBA:RefGenome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
844A5JST6    152   RS18_CAPHI 40S ribosomal protein S18 OS=Capra...383.6     30.4     34     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
845Q5TJE9    152   RS18_CANFA 40S ribosomal protein S18 OS=Canis...383.6     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; ISS:AgBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; ISS:RefGenome.::GO:0006412; P:translation; IEA:InterPro.
846Q3T0R1    152   RS18_BOVIN 40S ribosomal protein S18 OS=Bos t...383.6     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; ISS:AgBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; ISS:RefGenome.::GO:0006412; P:translation; IEA:InterPro.
847Q90YQ5    152   RS18_ICTPU 40S ribosomal protein S18 OS=Ictal...383.7     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; ISS:AgBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
848Q8JGS9    152   RS18_DANRE 40S ribosomal protein S18 OS=Danio...384.1     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; IBA:RefGenome.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0051726; P:regulation of cell cycle; IMP:ZFIN.::GO:0042254; P:ribosome biogenesis; IBA:RefGenome.::GO:0006412; P:translation; IEA:InterPro.
849Q3IQT9    170   RS13_NATPD 30S ribosomal protein S13P OS=Natr...338.8     29.6     39     61GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
850A2QX45    1362   DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergi...719.8     30     25     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0004525; F:ribonuclease III activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0050688; P:regulation of defense response to virus; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
records
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