Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL081C
Length:
143
Number of sequences:
5887
Description:
YNL081C SWS2 SGDID:S000005025, Chr XIV from 476619-476188, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811A0RY01    227   RS13_CENSY 30S ribosomal protein S13P OS=Cena...1310.019     37.4     26     38GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
812Q12ZR6    148   RS13_METBU 30S ribosomal protein S13P OS=Meth...1300.024     36.6     25     42GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
813Q8IT98    152   RS18_AEQIR 40S ribosomal protein S18 OS=Aequi...1340.025     36.6     22     43GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
814P54019    150   RS13_METJA 30S ribosomal protein S13P OS=JCM ...410.032     36.2     41     61GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
815Q0W1V6    224   RS13_UNCMA 30S ribosomal protein S13P OS=Uncu...470.068     35.8     36     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
816A6MW20    123   RR13_RHDSA 30S ribosomal protein S13, chlorop...900.087     34.7     32     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
817Q9V2W4    171   RS13_HALSA 30S ribosomal protein S13P OS=(Hal...1300.15     34.7     25     39GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
818P41094    152   RS18_DROME 40S ribosomal protein S18 OS=Droso...380.2     34.3     39     63GO:0022627; C:cytosolic small ribosomal subunit; IBA:RefGenome.::GO:0005811; C:lipid particle; IDA:FlyBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0000022; P:mitotic spindle elongation; IMP:FlyBase.::GO:0042254; P:ribosome biogenesis; IBA:RefGenome.::GO:0006412; P:translation; IEA:InterPro.
819Q8TRR2    162   RS13_METAC 30S ribosomal protein S13P OS=C2A)...1300.21     34.3     21     41GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; ISS:RefGenome.::GO:0006412; P:translation; IEA:InterPro.
820Q8PV19    162   RS13_METMA 30S ribosomal protein S13P OS=JCM ...1300.27     33.9     22     40GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
821Q8ISP0    152   RS18_BRABE 40S ribosomal protein S18 OS=Branc...1340.31     33.5     19     42GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
822Q46GC7    162   RS13_METBF 30S ribosomal protein S13P OS=Meth...1300.32     33.5     22     40GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
823Q97ZF0    530   TOP6B_SULSO Type 2 DNA topoisomerase 6 subuni...560.35     33.9     34     52GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
824O05207    530   TOP6B_SULSH Type 2 DNA topoisomerase 6 subuni...790.35     33.9     29     49GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
825P0CX56    146   RS18B_YEAST 40S ribosomal protein S18-B OS=Sa...1310.63     32.7     20     40GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
826P0CX55    146   RS18A_YEAST 40S ribosomal protein S18-A OS=Sa...1310.63     32.7     20     40GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
827P49202    153   RS18_CHLRE 40S ribosomal protein S18 OS=Chlam...530.74     32.7     28     58GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
828P15609    241   YM08_PARTE Uncharacterized mitochondrial prot...420.83     32.7     43     50GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:InterPro.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
829C3NDW7    530   TOP6B_SULIY Type 2 DNA topoisomerase 6 subuni...560.95     32.7     34     50GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
830C3NHT6    530   TOP6B_SULIN Type 2 DNA topoisomerase 6 subuni...560.95     32.7     34     50GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
831C3MYN1    530   TOP6B_SULIM Type 2 DNA topoisomerase 6 subuni...560.95     32.7     34     50GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
832C3MPN7    530   TOP6B_SULIL Type 2 DNA topoisomerase 6 subuni...560.95     32.7     34     50GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
833C4KGX9    530   TOP6B_SULIK Type 2 DNA topoisomerase 6 subuni...560.95     32.7     34     50GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
834C3N5B3    530   TOP6B_SULIA Type 2 DNA topoisomerase 6 subuni...560.95     32.7     34     50GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
835Q962R1    152   RS18_SPOFR 40S ribosomal protein S18 OS=Spodo...381     32.3     37     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
836Q869U7    154   RS18_DICDI 40S ribosomal protein S18 OS=Dicty...1421.9     31.6     19     39GO:0022627; C:cytosolic small ribosomal subunit; IBA:RefGenome.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; ISS:dictyBase.
GO:0042254; P:ribosome biogenesis; IBA:RefGenome.::GO:0006412; P:translation; ISS:dictyBase.
837Q6FE90    272   FPG_ACIAD Formamidopyrimidine-DNA glycosylase...602.2     31.6     35     52
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0008534; F:oxidized purine base lesion DNA N-glycosylase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006284; P:base-excision repair; IEA:InterPro.::GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
838Q8SRP2    153   RS18_ENCCU 40S ribosomal protein S18 OS=Encep...1402.4     31.2     25     39GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
839A2SSW0    150   RS13_METLZ 30S ribosomal protein S13P OS=Meth...452.5     31.2     36     56GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
840P62271    152   RS18_RAT 40S ribosomal protein S18 OS=Rattus ...383.6     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; TAS:RGD.
GO:0006417; P:regulation of translation; NAS:RGD.::GO:0042254; P:ribosome biogenesis; IBA:RefGenome.::GO:0006412; P:translation; IEA:InterPro.
841P62272    152   RS18_PIG 40S ribosomal protein S18 OS=Sus scr...383.6     30.4     34     63GO:0022627; C:cytosolic small ribosomal subunit; ISS:AgBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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