Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL079C
Length:
199
Number of sequences:
5887
Description:
YNL079C TPM1 SGDID:S000005023, Chr XIV from 479165-478566, Genome Release 64-1-1, reverse complement, Verified ORF, "Major isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; acetylated by the NatB complex and acetylated form binds actin most efficiently"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P17536    199   TPM1_YEAST Tropomyosin-1 OS=Saccharomyces cer...1997e-129     368     100     100GO:0032432; C:actin filament bundle; IDA:SGD.::GO:0000142; C:cellular bud neck contractile ring; IDA:SGD.
GO:0003786; F:actin lateral binding; TAS:SGD.
GO:0051017; P:actin filament bundle assembly; IGI:SGD.::GO:0008154; P:actin polymerization or depolymerization; TAS:SGD.::GO:0007118; P:budding cell apical bud growth; TAS:SGD.::GO:0007119; P:budding cell isotropic bud growth; TAS:SGD.::GO:0030010; P:establishment of cell polarity; TAS:SGD.::GO:0006887; P:exocytosis; TAS:SGD.::GO:0008298; P:intracellular mRNA localization; TAS:SGD.::GO:0000001; P:mitochondrion inheritance; TAS:SGD.::GO:0007124; P:pseudohyphal growth; IMP:SGD.::GO:0000011; P:vacuole inheritance; TAS:SGD.
2P40414    161   TPM2_YEAST Tropomyosin-2 OS=Saccharomyces cer...1995e-54     176     52     71GO:0032432; C:actin filament bundle; IDA:SGD.::GO:0000142; C:cellular bud neck contractile ring; IDA:SGD.
GO:0003786; F:actin lateral binding; TAS:SGD.
GO:0051017; P:actin filament bundle assembly; IGI:SGD.::GO:0008154; P:actin polymerization or depolymerization; TAS:SGD.::GO:0007118; P:budding cell apical bud growth; TAS:SGD.::GO:0007119; P:budding cell isotropic bud growth; TAS:SGD.::GO:0030010; P:establishment of cell polarity; TAS:SGD.::GO:0006887; P:exocytosis; TAS:SGD.::GO:0008298; P:intracellular mRNA localization; TAS:SGD.::GO:0000001; P:mitochondrion inheritance; TAS:SGD.::GO:0000011; P:vacuole inheritance; TAS:SGD.
3Q02088    161   TPM_SCHPO Tropomyosin OS=Schizosaccharomyces ...630.00000000003     62.4     52     76GO:0032432; C:actin filament bundle; IDA:PomBase.::GO:0005826; C:actomyosin contractile ring; IDA:PomBase.
GO:0003779; F:actin binding; TAS:PomBase.
GO:0071519; P:actin filament bundle assembly involved in actomyosin contractile ring formation; NAS:PomBase.::GO:0032220; P:plasma membrane fusion involved in cytogamy; IMP:PomBase.
4Q8IT89    284   TPM_HAELO Tropomyosin OS=Haemaphysalis longic...2030.0004     43.9     29     51
5Q21313    3672   EPI1_CAEEL Laminin-like protein epi-1 OS=Caen...1900.0004     44.3     26     48GO:0005604; C:basement membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.
6P24043    3122   LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo s...1830.045     38.1     22     43GO:0005606; C:laminin-1 complex; IEA:InterPro.
GO:0005102; F:receptor binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; TAS:ProtInc.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0007517; P:muscle organ development; TAS:ProtInc.::GO:0030155; P:regulation of cell adhesion; IEA:InterPro.::GO:0030334; P:regulation of cell migration; IEA:InterPro.::GO:0045995; P:regulation of embryonic development; IEA:InterPro.
7Q60675    3106   LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus mu...2090.036     38.5     20     44GO:0005606; C:laminin-1 complex; IEA:InterPro.
GO:0005102; F:receptor binding; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0030155; P:regulation of cell adhesion; IEA:InterPro.::GO:0030334; P:regulation of cell migration; IEA:InterPro.::GO:0045995; P:regulation of embryonic development; IEA:InterPro.
8P15800    1801   LAMB2_RAT Laminin subunit beta-2 OS=Rattus no...1890.001     42.7     20     46GO:0005604; C:basement membrane; IEA:UniProtKB-SubCell.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
9Q9JIR0    1847   RIMB1_RAT Peripheral-type benzodiazepine rece...1590.8     34.3     23     48GO:0005739; C:mitochondrion; IDA:RGD.
10Q7TNF8    1846   RIMB1_MOUSE Peripheral-type benzodiazepine re...1524.3     32     22     49GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
11Q7Z5H3    698   RHG22_HUMAN Rho GTPase-activating protein 22 ...1390.002     42.4     27     50GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051056; P:regulation of small GTPase mediated signal transduction; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q9GZ69    284   TPM_MIMNO Tropomyosin OS=Mimachlamys nobilis ...1860.002     41.6     32     49
13P02469    1786   LAMB1_MOUSE Laminin subunit beta-1 OS=Mus mus...1800.002     42     23     49GO:0005606; C:laminin-1 complex; IDA:MGI.::GO:0043259; C:laminin-10 complex; IPI:MGI.::GO:0005607; C:laminin-2 complex; ISS:HGNC.::GO:0043257; C:laminin-8 complex; ISS:HGNC.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0019899; F:enzyme binding; IPI:MGI.::GO:0005201; F:extracellular matrix structural constituent; ISS:HGNC.::GO:0043208; F:glycosphingolipid binding; IDA:MGI.::GO:0005178; F:integrin binding; IMP:MGI.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0016477; P:cell migration; IMP:MGI.::GO:0007566; P:embryo implantation; IMP:MGI.::GO:0007611; P:learning or memory; NAS:UniProtKB.::GO:0007162; P:negative regulation of cell adhesion; IDA:UniProtKB.::GO:0031175; P:neuron projection development; IDA:MGI.::GO:0042476; P:odontogenesis; ISS:HGNC.::GO:0030335; P:positive regulation of cell migration; ISS:HGNC.
14O02389    284   TPM_CHLNI Tropomyosin OS=Chlamys nipponensis ...1650.003     41.2     33     49
15P43689    284   TPM2_BIOGL Tropomyosin-2 OS=Biomphalaria glab...2030.005     40.4     28     50
16Q9NFZ4    284   TPM_LEPDS Tropomyosin OS=Lepidoglyphus destru...2030.006     40     27     49
17O18416    284   TPM_DERPT Tropomyosin OS=Dermatophagoides pte...1300.007     40     33     55
18P10587    1979   MYH11_CHICK Myosin-11 OS=Gallus gallus (Chick...2100.008     40.4     30     50GO:0030016; C:myofibril; IEA:UniProtKB-SubCell.::GO:0032982; C:myosin filament; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0008307; F:structural constituent of muscle; ISS:UniProtKB.
GO:0048739; P:cardiac muscle fiber development; ISS:UniProtKB.::GO:0048251; P:elastic fiber assembly; ISS:UniProtKB.::GO:0030241; P:skeletal muscle myosin thick filament assembly; ISS:UniProtKB.::GO:0006939; P:smooth muscle contraction; ISS:UniProtKB.
19P42636    284   TPM1_BIOGL Tropomyosin-1 OS=Biomphalaria glab...2030.008     39.7     28     50
20O97162    284   TPM_BOOMI Tropomyosin OS=Boophilus microplus ...1300.008     39.7     33     55
21Q8WR63    284   TPM_TRIPS Tropomyosin OS=Trichinella pseudosp...2160.009     39.7     28     48
22P86704    284   TPM_PANBO Tropomyosin OS=Pandalus borealis (N...2100.01     39.7     26     54
23A1KYZ2    284   TPM_PENMO Tropomyosin OS=Penaeus monodon (Gia...2100.012     39.3     25     55
24O95153    1857   RIMB1_HUMAN Peripheral-type benzodiazepine re...1960.015     39.7     22     43GO:0005739; C:mitochondrion; IDA:UniProtKB.
GO:0030156; F:benzodiazepine receptor binding; IPI:UniProtKB.
25Q07DZ5    1635   CTTB2_ORNAN Cortactin-binding protein 2 OS=Or...1422.3     32.7     23     43
26A2V735    284   TPM_CHIOP Tropomyosin OS=Chionoecetes opilio ...2110.018     38.9     28     54
27P07942    1786   LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sa...1790.018     39.3     23     44GO:0005615; C:extracellular space; IDA:UniProtKB.::GO:0005606; C:laminin-1 complex; IDA:UniProtKB.::GO:0043259; C:laminin-10 complex; IDA:UniProtKB.::GO:0005607; C:laminin-2 complex; IDA:UniProtKB.::GO:0043257; C:laminin-8 complex; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0005201; F:extracellular matrix structural constituent; IDA:HGNC.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0042476; P:odontogenesis; IDA:UniProtKB.::GO:0030335; P:positive regulation of cell migration; IDA:UniProtKB.::GO:0050679; P:positive regulation of epithelial cell proliferation; TAS:HGNC.::GO:0034446; P:substrate adhesion-dependent cell spreading; IDA:BHF-UCL.
28Q00174    3712   LAMA_DROME Laminin subunit alpha OS=Drosophil...1831.3     33.5     25     47GO:0005606; C:laminin-1 complex; IEA:InterPro.
GO:0005102; F:receptor binding; IEA:InterPro.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0048854; P:brain morphogenesis; IMP:FlyBase.::GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0016321; P:female meiosis chromosome segregation; IMP:FlyBase.::GO:0007507; P:heart development; IMP:FlyBase.::GO:0002121; P:inter-male aggressive behavior; IMP:FlyBase.::GO:0031987; P:locomotion involved in locomotory behavior; IMP:FlyBase.::GO:0007498; P:mesoderm development; IEP:FlyBase.::GO:0030155; P:regulation of cell adhesion; IEA:InterPro.::GO:0030334; P:regulation of cell migration; IEA:InterPro.::GO:0045995; P:regulation of embryonic development; IEA:InterPro.::GO:0001964; P:startle response; IMP:FlyBase.
29Q9Y7Y1    547   SGM1_SCHPO Protein sgm1 OS=Schizosaccharomyce...1250.021     38.9     34     56GO:0005829; C:cytosol; IDA:PomBase.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0003712; F:transcription cofactor activity; ISS:PomBase.
GO:0006356; P:regulation of transcription from RNA polymerase I promoter; ISS:PomBase.
30Q23939    284   TPM_DERFA Tropomyosin OS=Dermatophagoides far...1300.022     38.5     32     55
31Q25457    284   TPM_MYTED Tropomyosin OS=Mytilus edulis (Blue...1030.033     38.1     33     59
records
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