Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL079C
Length:
199
Number of sequences:
5887
Description:
YNL079C TPM1 SGDID:S000005023, Chr XIV from 479165-478566, Genome Release 64-1-1, reverse complement, Verified ORF, "Major isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; acetylated by the NatB complex and acetylated form binds actin most efficiently"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q25457    284   TPM_MYTED Tropomyosin OS=Mytilus edulis (Blue...1030.033     38.1     33     59
32P91958    284   TPM_MYTGA Tropomyosin OS=Mytilus galloprovinc...1030.033     38.1     33     59
33O44119    284   TPM_HOMAM Tropomyosin OS=Homarus americanus (...2140.034     37.7     26     47
34Q9N2R3    264   TPM_CHAFE Tropomyosin OS=Charybdis feriatus (...2110.036     37.7     27     55
35Q95VA8    284   TPM_TRISP Tropomyosin OS=Trichinella spiralis...2160.045     37.4     28     47
36P42638    284   TPM2_SCHMA Tropomyosin-2 OS=Schistosoma manso...1739.2     30.4     26     55
37Q61292    1799   LAMB2_MOUSE Laminin subunit beta-2 OS=Mus mus...1890.085     37.4     20     45GO:0005608; C:laminin-3 complex; IDA:MGI.::GO:0019717; C:synaptosome; IDA:MGI.
GO:0005178; F:integrin binding; IPI:MGI.
GO:0014002; P:astrocyte development; IGI:MGI.::GO:0048677; P:axon extension involved in regeneration; IMP:MGI.::GO:0007411; P:axon guidance; IGI:MGI.::GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0072274; P:metanephric glomerular basement membrane development; IMP:MGI.::GO:0072249; P:metanephric glomerular visceral epithelial cell development; IMP:MGI.::GO:0007528; P:neuromuscular junction development; IMP:MGI.::GO:0060041; P:retina development in camera-type eye; IGI:MGI.::GO:0014044; P:Schwann cell development; IDA:MGI.::GO:0007601; P:visual perception; IGI:MGI.
38Q1HPU0    284   TPM1_BOMMO Tropomyosin-1 OS=Bombyx mori (Silk...2090.087     36.6     26     53
39Q9GZ71    284   TPM_HALDV Tropomyosin OS=Haliotis diversicolo...2030.092     36.6     28     48
40Q8T380    284   TPM_LEPSA Tropomyosin OS=Lepisma saccharina (...2115.1     31.2     24     51
41Q86YV0    1011   RASL3_HUMAN RAS protein activator like-3 OS=H...1330.14     36.6     22     48GO:0005737; C:cytoplasm; IBA:RefGenome.::GO:0031235; C:intrinsic to internal side of plasma membrane; IBA:RefGenome.
GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0005099; F:Ras GTPase activator activity; IBA:RefGenome.
GO:0046580; P:negative regulation of Ras protein signal transduction; IBA:RefGenome.::GO:0007165; P:signal transduction; IEA:InterPro.
42Q61789    3333   LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus mu...2100.2     36.2     22     40GO:0005606; C:laminin-1 complex; IEA:InterPro.
GO:0005102; F:receptor binding; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0030155; P:regulation of cell adhesion; IEA:InterPro.::GO:0030334; P:regulation of cell migration; IEA:InterPro.::GO:0045995; P:regulation of embryonic development; IEA:InterPro.
43Q9NDS0    284   TPM_BRABE Tropomyosin OS=Branchiostoma belche...1860.23     35.4     26     50
44O97192    284   TPM_HELAS Tropomyosin OS=Helix aspersa (Brown...2030.29     35     27     48
45Q8WXE1    791   ATRIP_HUMAN ATR-interacting protein OS=Homo s...1450.33     35.4     26     43GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000077; P:DNA damage checkpoint; TAS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; TAS:Reactome.
46Q9GZ70    284   TPM_PERVI Tropomyosin OS=Perna viridis (Tropi...1720.37     34.7     30     51
47P02468    1607   LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus mu...1950.38     35     22     45GO:0005604; C:basement membrane; ISS:HGNC.
GO:0005201; F:extracellular matrix structural constituent; ISS:HGNC.
GO:0007155; P:cell adhesion; ISS:HGNC.::GO:0016477; P:cell migration; ISS:HGNC.::GO:0022617; P:extracellular matrix disassembly; ISS:HGNC.::GO:0031581; P:hemidesmosome assembly; ISS:HGNC.::GO:0006461; P:protein complex assembly; ISS:HGNC.
48Q8BMG1    785   ATRIP_MOUSE ATR-interacting protein OS=Mus mu...1070.4     35     27     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
49Q921C5    820   BICD2_MOUSE Protein bicaudal D homolog 2 OS=M...1320.43     35     29     52GO:0031410; C:cytoplasmic vesicle; IDA:BHF-UCL.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IDA:BHF-UCL.
GO:0017137; F:Rab GTPase binding; IPI:BHF-UCL.
GO:0072393; P:microtubule anchoring at microtubule organizing center; IMP:BHF-UCL.::GO:0072385; P:minus-end-directed organelle transport along microtubule; IMP:BHF-UCL.
50P13104    284   TPM1_DANRE Tropomyosin alpha-1 chain OS=Danio...1840.56     34.3     26     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
51Q95PU1    284   TPM_ECHMU Tropomyosin OS=Echinococcus multilo...2070.56     34.3     28     47
52P58773    284   TPM1_COTJA Tropomyosin alpha-1 chain OS=Cotur...1840.58     34.3     25     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
53P04268    284   TPM1_CHICK Tropomyosin alpha-1 chain OS=Gallu...1840.58     34.3     25     53
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
54P13105    284   TPM1_RANTE Tropomyosin alpha-1 chain OS=Rana ...1840.77     33.9     26     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
55Q28628    1087   AKAP9_RABIT A-kinase anchor protein 9 OS=Oryc...920.84     33.9     32     54GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
56P58775    284   TPM2_RAT Tropomyosin beta chain OS=Rattus nor...2070.85     33.5     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
57P58776    284   TPM2_RABIT Tropomyosin beta chain OS=Oryctola...2070.85     33.5     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
58P58774    284   TPM2_MOUSE Tropomyosin beta chain OS=Mus musc...2070.85     33.5     27     52GO:0005862; C:muscle thin filament tropomyosin; TAS:MGI.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005200; F:structural constituent of cytoskeleton; TAS:MGI.
GO:0006936; P:muscle contraction; TAS:MGI.
59Q5KR48    284   TPM2_BOVIN Tropomyosin beta chain OS=Bos taur...2070.85     33.5     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
60Q8TD16    824   BICD2_HUMAN Protein bicaudal D homolog 2 OS=H...1220.86     33.9     30     52GO:0031410; C:cytoplasmic vesicle; ISS:BHF-UCL.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0017137; F:Rab GTPase binding; ISS:BHF-UCL.
GO:0072393; P:microtubule anchoring at microtubule organizing center; ISS:BHF-UCL.::GO:0072385; P:minus-end-directed organelle transport along microtubule; ISS:BHF-UCL.
61Q6R6L0    653   BEGIN_SHEEP Brain-enriched guanylate kinase-a...930.91     33.9     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
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