Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL072W
Length:
307
Number of sequences:
5887
Description:
YNL072W RNH201 SGDID:S000005016, Chr XIV from 490317-491240, Genome Release 64-1-1, Verified ORF, "Ribonuclease H2 catalytic subunit, removes RNA primers during Okazaki fragment synthesis and errant ribonucleotides misincorporated during DNA replication; homolog of RNAse HI; related to human AGS4 which causes Aicardi-Goutieres syndrome"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53942    307   RNH2A_YEAST Ribonuclease H2 subunit A OS=Sacc...3070     637     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD.::GO:0032299; C:ribonuclease H2 complex; IDA:SGD.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004523; F:ribonuclease H activity; IMP:SGD.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0043137; P:DNA replication, removal of RNA primer; IDA:SGD.
2Q9P5X8    317   RNH2A_NEUCR Ribonuclease H2 subunit A OS=1257...2691e-70     228     48     65
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
3Q10236    326   RNH2A_SCHPO Ribonuclease H2 subunit A OS=Schi...2885e-64     211     43     60GO:0005634; C:nucleus; ISS:PomBase.::GO:0032299; C:ribonuclease H2 complex; ISS:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; ISS:PomBase.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0043137; P:DNA replication, removal of RNA primer; IC:PomBase.
4Q9SEZ6    296   RNH2A_ARATH Ribonuclease H2 subunit A OS=Arab...2777e-60     199     41     56
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
5Q5U209    301   RNH2A_RAT Ribonuclease H2 subunit A OS=Rattus...2571e-58     196     44     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0032299; C:ribonuclease H2 complex; ISS:UniProtKB.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; ISS:UniProtKB.
6Q2TBT5    299   RNH2A_BOVIN Ribonuclease H2 subunit A OS=Bos ...2562e-57     193     42     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0032299; C:ribonuclease H2 complex; ISS:UniProtKB.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; ISS:UniProtKB.
7Q9CWY8    301   RNH2A_MOUSE Ribonuclease H2 subunit A OS=Mus ...2561e-56     191     43     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0032299; C:ribonuclease H2 complex; ISS:UniProtKB.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; ISS:UniProtKB.
8O75792    299   RNH2A_HUMAN Ribonuclease H2 subunit A OS=Homo...2646e-54     184     41     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0032299; C:ribonuclease H2 complex; IDA:UniProtKB.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IDA:UniProtKB.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; TAS:UniProtKB.::GO:0006401; P:RNA catabolic process; IDA:UniProtKB.
9Q9U6P6    297   RNH2A_CAEEL Ribonuclease H2 subunit A OS=Caen...2693e-53     182     40     58
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
10Q54D13    289   RNH2A_DICDI Ribonuclease H2 subunit A OS=Dict...2379e-49     170     43     59GO:0032299; C:ribonuclease H2 complex; ISS:dictyBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; ISS:dictyBase.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0016070; P:RNA metabolic process; IC:dictyBase.
11Q9VPP5    347   RNH2A_DROME Ribonuclease H2 subunit A OS=Dros...2581e-48     171     41     55
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
12A4FWE5    239   RNH2_METM5 Ribonuclease HII OS=Methanococcus ...2392e-26     108     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
13A9A9T9    239   RNH2_METM6 Ribonuclease HII OS=Methanococcus ...2402e-26     108     35     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
14A6UQ18    244   RNH2_METVS Ribonuclease HII OS=Methanococcus ...2506e-26     107     35     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
15A6VGW0    239   RNH2_METM7 Ribonuclease HII OS=Methanococcus ...2367e-25     104     35     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
16O59351    220   RNH2_PYRHO Ribonuclease HII OS=NBRC 100139 / ...2363e-24     102     32     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
17Q6LXH7    242   RNH2_METMP Ribonuclease HII OS=Methanococcus ...2354e-23     99.8     34     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
18O27102    206   RNH2_METTH Ribonuclease HII OS=thermoautotrop...2225e-23     98.6     34     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
19O74035    228   RNH2_PYRKO Ribonuclease HII OS=(Thermococcus ...2322e-22     97.1     36     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
20Q8U036    224   RNH2_PYRFU Ribonuclease HII OS=Pyrococcus fur...2235e-22     96.3     33     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
21A2BL34    240   RNH2_HYPBU Ribonuclease HII OS=Hyperthermus b...2216e-22     96.3     32     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
22Q8TPF4    223   RNH2_METAC Ribonuclease HII OS=C2A). GN=rnhB ...2371e-21     94.7     32     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
23P57673    212   RNH2_THEAC Ribonuclease HII OS=NBRC 15155 / A...2232e-21     94.4     33     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
24A1RYM0    213   RNH2_THEPD Ribonuclease HII OS=Thermofilum pe...2312e-21     94.4     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
25Q974Z3    208   RNH2_SULTO Ribonuclease HII OS=Sulfolobus tok...2223e-21     93.6     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
26A2STJ6    212   RNH2_METLZ Ribonuclease HII OS=Methanocorpusc...2323e-21     93.6     36     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
27Q8PTA3    220   RNH2_METMA Ribonuclease HII OS=JCM 11833 / OC...2385e-21     93.2     32     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
28Q97CG6    212   RNH2_THEVO Ribonuclease HII OS=15438 / GSS1)....2302e-20     91.3     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
29B6YVT5    227   RNH2_THEON Ribonuclease HII OS=Thermococcus o...2332e-20     91.3     34     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
30Q97W56    212   RNH2_SULSO Ribonuclease HII OS=P2). GN=rnhB O...2263e-20     90.9     34     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
31Q57599    230   RNH2_METJA Ribonuclease HII OS=JCM 10045 / NB...2499e-20     89.7     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 706 1 - 30
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::