Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL072W
Length:
307
Number of sequences:
5887
Description:
YNL072W RNH201 SGDID:S000005016, Chr XIV from 490317-491240, Genome Release 64-1-1, Verified ORF, "Ribonuclease H2 catalytic subunit, removes RNA primers during Okazaki fragment synthesis and errant ribonucleotides misincorporated during DNA replication; homolog of RNAse HI; related to human AGS4 which causes Aicardi-Goutieres syndrome"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661A5FIL7    221   RNH2_FLAJ1 Ribonuclease HII OS=(Cytophaga joh...1750.65     34.7     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
662Q3J9L3    201   RNH2_NITOC Ribonuclease HII OS=Nitrosococcus ...560.66     34.7     34     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
663Q65GD8    313   RNH3_BACLD Ribonuclease HIII OS=Bacillus lich...2130.67     35     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
664Q1IMM1    254   RNH2_KORVE Ribonuclease HII OS=Koribacter ver...700.75     34.7     33     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
665A5FR86    212   RNH2_DEHSB Ribonuclease HII OS=Dehalococcoide...1920.77     34.3     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
666B9DS69    257   RNH2_STRU0 Ribonuclease HII OS=Streptococcus ...280.9     34.3     54     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
667B9LAL2    212   RNH2_CHLSY Ribonuclease HII OS=Chloroflexus a...1750.91     34.3     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
668A9WIH1    212   RNH2_CHLAA Ribonuclease HII OS=Chloroflexus a...1750.91     34.3     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
669Q2NCP5    212   RNH2_ERYLH Ribonuclease HII OS=Erythrobacter ...560.92     34.3     41     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
670Q6NGJ8    229   RNH2_CORDI Ribonuclease HII OS=gravis). GN=rn...1821     34.3     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
671B1MZ17    260   RNH2_LEUCK Ribonuclease HII OS=Leuconostoc ci...1721     34.3     24     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
672P42858    3142   HD_HUMAN Huntingtin OS=Homo sapiens (Human). ...611.1     35     33     52GO:0005776; C:autophagic vacuole; IDA:UniProtKB.::GO:0030424; C:axon; IDA:UniProtKB.::GO:0030659; C:cytoplasmic vesicle membrane; IDA:UniProtKB.::GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:UniProtKB.::GO:0005770; C:late endosome; IDA:UniProtKB.::GO:0005624; C:membrane fraction; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0043234; C:protein complex; IDA:UniProtKB.
GO:0048487; F:beta-tubulin binding; IDA:UniProtKB.::GO:0034452; F:dynactin binding; IPI:UniProtKB.::GO:0045505; F:dynein intermediate chain binding; IDA:UniProtKB.::GO:0002039; F:p53 binding; IPI:UniProtKB.::GO:0008134; F:transcription factor binding; IBA:RefGenome.
GO:0000132; P:establishment of mitotic spindle orientation; IMP:UniProtKB.::GO:0007030; P:Golgi organization; IMP:UniProtKB.::GO:2001237; P:negative regulation of extrinsic apoptotic signaling pathway; IMP:UniProtKB.::GO:0034047; P:regulation of protein phosphatase type 2A activity; IMP:dictyBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:UniProtKB.::GO:0047496; P:vesicle transport along microtubule; IMP:UniProtKB.
673Q5L5M0    212   RNH2_CHLAB Ribonuclease HII OS=Chlamydophila ...761.1     33.9     32     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
674Q87MF1    211   RNH2_VIBPA Ribonuclease HII OS=Vibrio parahae...591.1     33.9     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
675Q87EI6    234   RNH2_XYLFT Ribonuclease HII OS=Xylella fastid...681.3     33.9     31     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
676B2I7N7    234   RNH2_XYLF2 Ribonuclease HII OS=Xylella fastid...681.3     33.9     31     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
677A9M3R5    194   RNH2_NEIM0 Ribonuclease HII OS=Neisseria meni...1701.3     33.5     26     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
678Q822M7    212   RNH2_CHLCV Ribonuclease HII OS=Chlamydophila ...761.4     33.5     32     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
679Q03S83    257   RNH2_LACBA Ribonuclease HII OS=Lactobacillus ...761.4     33.9     29     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
680Q9PEI7    234   RNH2_XYLFA Ribonuclease HII OS=Xylella fastid...661.4     33.9     30     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
681O31744    255   RNH2_BACSU Ribonuclease HII OS=Bacillus subti...821.5     33.9     29     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
682Q7VYB6    201   RNH2_BORPE Ribonuclease HII OS=Bordetella per...461.7     33.5     41     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
683Q7WA46    201   RNH2_BORPA Ribonuclease HII OS=Bordetella par...461.7     33.5     41     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
684Q7WJ80    201   RNH2_BORBR Ribonuclease HII OS=(Alcaligenes b...461.7     33.5     41     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
685B0U235    234   RNH2_XYLFM Ribonuclease HII OS=Xylella fastid...661.7     33.5     30     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
686P0CN91    1585   ATG26_CRYNB Sterol 3-beta-glucosyltransferase...511.7     34.3     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0016906; F:sterol 3-beta-glucosyltransferase activity; IEA:EC.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0030259; P:lipid glycosylation; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016126; P:sterol biosynthetic process; IEA:UniProtKB-KW.
687P0CN90    1585   ATG26_CRYNJ Sterol 3-beta-glucosyltransferase...511.7     34.3     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0016906; F:sterol 3-beta-glucosyltransferase activity; IEA:EC.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0030259; P:lipid glycosylation; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016126; P:sterol biosynthetic process; IEA:UniProtKB-KW.
688A7MY01    212   RNH2_VIBHB Ribonuclease HII OS=Vibrio harveyi...591.9     33.1     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
689Q5SLU5    203   RNH2_THET8 Ribonuclease HII OS=Thermus thermo...612     33.1     33     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
690A8LJU6    206   RNH2_DINSH Ribonuclease HII OS=Dinoroseobacte...2022     33.1     26     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
691B0U5G3    354   MTNA_XYLFM Methylthioribose-1-phosphate isome...732.2     33.5     34     47
GO:0046523; F:S-methyl-5-thioribose-1-phosphate isomerase activity; IEA:EC.
GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.
records
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