UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL054W

Length:

440

Number of sequences:

5887

Description:

YNL054W-A YNL054W-A SGDID:S000007384, Chr XIV from 519456-520778, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P53950	1165	VAC7_YEAST Vacuolar segregation protein 7 OS=...	1165	0	2361	100	100	GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.::GO:0016021; C:integral to membrane; IDA:SGD.::GO:0070772; C:PAS complex; IDA:SGD.
									GO:0033674; P:positive regulation of kinase activity; IGI:SGD.::GO:0010513; P:positive regulation of phosphatidylinositol biosynthetic process; IGI:SGD.
2	Q8K9P7	853	TOP1_BUCAP DNA topoisomerase 1 OS=Buchnera ap...	261	0.006	44.3	25	42	GO:0005694; C:chromosome; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:InterPro.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006265; P:DNA topological change; IEA:InterPro.
3	Q6ZU64	1925	CC108_HUMAN Coiled-coil domain-containing pro...	141	0.12	40.4	26	46	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
									GO:0005198; F:structural molecule activity; IEA:InterPro.
4	A5E212	1859	UTP10_LODEL U3 small nucleolar RNA-associated...	81	3.8	35.4	28	54	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
									GO:0005488; F:binding; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.

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