Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL039W
Length:
594
Number of sequences:
5887
Description:
YNL039W BDP1 SGDID:S000004984, Chr XIV from 555048-556832, Genome Release 64-1-1, Verified ORF, "Essential subunit of RNA polymerase III transcription factor (TFIIIB), which is involved in transcription of genes encoding tRNAs, 5S rRNA, U6 snRNA, and other small RNAs"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P46678    594   TFC5_YEAST Transcription factor TFIIIB compon...5940     1217     100     100GO:0000126; C:transcription factor TFIIIB complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0001026; F:TFIIIB-type transcription factor activity; IC:SGD.::GO:0001156; F:TFIIIC-class transcription factor binding; IDA:SGD.
GO:0001112; P:DNA-dependent transcriptional open complex formation; IMP:SGD.::GO:0070896; P:positive regulation of transposon integration; IDA:SGD.::GO:0070898; P:RNA polymerase III transcriptional preinitiation complex assembly; IMP:SGD.
2O94481    507   TFC5_SCHPO Transcription factor TFIIIB compon...1174e-20     97.4     38     60GO:0000126; C:transcription factor TFIIIB complex; ISS:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006383; P:transcription from RNA polymerase III promoter; ISS:PomBase.
3A6H8Y1    2624   BDP1_HUMAN Transcription factor TFIIIB compon...1370.000000000000005     82.8     34     58GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006383; P:transcription from RNA polymerase III promoter; TAS:Reactome.
4Q571C7    2467   BDP1_MOUSE Transcription factor TFIIIB compon...1370.000000000000009     82     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q90WN5    431   RCOR1_XENLA REST corepressor 1 OS=Xenopus lae...522     35     35     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q2S2B6    966   SYA_SALRD Alanine--tRNA ligase OS=Salinibacte...1361.8     35.4     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
7Q6PGA0    451   RCOR3_MOUSE REST corepressor 3 OS=Mus musculu...503.5     34.3     30     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q8CFE3    477   RCOR1_MOUSE REST corepressor 1 OS=Mus musculu...354.8     33.9     40     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030218; P:erythrocyte differentiation; IMP:UniProtKB.::GO:0045654; P:positive regulation of megakaryocyte differentiation; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q9UKL0    482   RCOR1_HUMAN REST corepressor 1 OS=Homo sapien...354.8     33.9     40     60GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0001078; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0007596; P:blood coagulation; TAS:Reactome.::GO:0070933; P:histone H4 deacetylation; IDA:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
10Q9P2K3    495   RCOR3_HUMAN REST corepressor 3 OS=Homo sapien...505.1     33.5     30     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q5ZJ40    378   RCOR3_CHICK REST corepressor 3 OS=Gallus gall...505.3     33.5     30     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12A5FAX4    190   MOBA_FLAJ1 Probable molybdenum cofactor guany...1149.6     32     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0006777; P:Mo-molybdopterin cofactor biosynthetic process; IEA:UniProtKB-KW.
records
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