Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL025C
Length:
323
Number of sequences:
5887
Description:
YNL025C SSN8 SGDID:S000004970, Chr XIV from 585291-584320, Genome Release 64-1-1, reverse complement, Verified ORF, "Cyclin-like component of the RNA polymerase II holoenzyme, involved in phosphorylation of the RNA polymerase II C-terminal domain; involved in glucose repression and telomere maintenance"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P47821    323   SSN8_YEAST RNA polymerase II holoenzyme cycli...3230     671     100     100GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:SGD.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; IMP:SGD.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000411; P:positive regulation of transcription by galactose; IMP:SGD.::GO:0010673; P:positive regulation of transcription from RNA polymerase II promoter during meiosis; IMP:SGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q6FJE8    339   SSN8_CANGA RNA polymerase II holoenzyme cycli...3400     526     74     84GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3Q75AX7    332   SSN8_ASHGO RNA polymerase II holoenzyme cycli...3226e-167     475     69     83GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q6CP20    304   SSN8_KLULA RNA polymerase II holoenzyme cycli...3194e-149     428     66     79GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5A3LPX1    346   SSN8_PICST RNA polymerase II holoenzyme cycli...3631e-94     291     44     61GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q6BYF8    345   SSN8_DEBHA RNA polymerase II holoenzyme cycli...3631e-89     278     45     60GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q5A4H9    434   SSN8_CANAL RNA polymerase II holoenzyme cycli...460.098     37.7     33     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0031505; P:fungal-type cell wall organization; IMP:CGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q6CAC7    280   SSN8_YARLI RNA polymerase II holoenzyme cycli...3063e-79     249     43     62GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q4WZT9    302   SSN8_ASPFU RNA polymerase II holoenzyme cycli...3302e-67     219     38     58GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q5BBA8    302   SSN8_EMENI RNA polymerase II holoenzyme cycli...3285e-67     218     37     57GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q0CV29    301   SSN8_ASPTN RNA polymerase II holoenzyme cycli...3291e-66     218     37     55GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q2UDB2    301   SSN8_ASPOR RNA polymerase II holoenzyme cycli...3281e-66     217     38     55GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13A1C7R6    302   SSN8_ASPCL RNA polymerase II holoenzyme cycli...3314e-60     201     37     56GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q1EAW8    318   SSN8_COCIM RNA polymerase II holoenzyme cycli...3381e-58     197     33     54GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q9C1M4    319   SSN8_GIBMO RNA polymerase II holoenzyme cycli...3423e-46     164     29     51GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q9HE63    345   SSN8_NEUCR RNA polymerase II holoenzyme cycli...2571e-45     164     35     55GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17Q2GVK1    364   SSN8_CHAGB RNA polymerase II holoenzyme cycli...2297e-45     162     38     59GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18A4RD79    363   SSN8_MAGO7 RNA polymerase II holoenzyme cycli...521.8     33.9     35     60GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q29AI1    267   CCNC_DROPS Cyclin-C OS=Drosophila pseudoobscu...3204e-32     125     30     44GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0019901; F:protein kinase binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.
20Q3ZCK5    283   CCNC_BOVIN Cyclin-C OS=Bos taurus (Bovine). G...3151e-31     125     29     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21P55168    283   CCNC_CHICK Cyclin-C OS=Gallus gallus (Chicken...3151e-31     124     29     46GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22Q4KLA0    283   CCNC_XENLA Cyclin-C OS=Xenopus laevis (Africa...3151e-31     124     29     46GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23Q28F72    283   CCNC_XENTR Cyclin-C OS=Xenopus tropicalis (We...3151e-31     124     29     46GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24P25008    267   CCNC_DROME Cyclin-C OS=Drosophila melanogaste...3202e-31     123     30     44GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:UniProtKB.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; IDA:FlyBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IMP:UniProtKB.
GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0036011; P:imaginal disc-derived leg segmentation; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0045498; P:sex comb development; IMP:FlyBase.
25P24863    283   CCNC_HUMAN Cyclin-C OS=Homo sapiens (Human). ...3152e-31     124     28     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
26Q62447    283   CCNC_MOUSE Cyclin-C OS=Mus musculus (Mouse). ...3157e-31     122     28     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:MGI.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
27O94503    228   SRB11_SCHPO RNA polymerase II holoenzyme cycl...1635e-30     119     39     61GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:PomBase.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28Q16JA2    265   CCNC_AEDAE Cyclin-C OS=Aedes aegypti (Yellowf...3296e-29     117     29     44GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
29P39947    278   CCNC_RAT Cyclin-C OS=Rattus norvegicus (Rat)....3153e-28     115     28     44GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; TAS:RGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
30Q7QB13    266   CCNC_ANOGA Cyclin-C OS=Anopheles gambiae (Afr...3181e-26     110     29     43GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31Q86KE7    255   CCNC_DICDI Cyclin-C OS=Dictyostelium discoide...1758e-24     102     34     54GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; ISS:dictyBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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