rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
811 | Q9Y7Y3 | 233 | YGR4_SCHPO Uncharacterized RNA-binding protei... | 122 | 0.13 | 37.7 | 27 | 51 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; ISS:PomBase. | 812 | Q01560 | 414 | NOP3_YEAST Nucleolar protein 3 OS=Saccharomyc... | 178 | 0.13 | 38.1 | 21 | 40 | GO:0005737; C:cytoplasm; IMP:SGD.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IGI:SGD.::GO:2000805; P:negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled; IDA:SGD.::GO:0017148; P:negative regulation of translation; IDA:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006415; P:translational termination; IMP:SGD. | 813 | Q9DDY9 | 296 | PAB2A_XENLA Polyadenylate-binding protein 2-A... | 76 | 0.13 | 38.1 | 29 | 51 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 814 | Q298C0 | 274 | EI3G2_DROPS Eukaryotic translation initiation... | 73 | 0.13 | 37.7 | 26 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 815 | Q2L4W6 | 567 | SPO5_SCHPO Sporulation-specific protein 5 OS=... | 72 | 0.13 | 38.5 | 29 | 44 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0033620; C:Mei2 nuclear dot; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0032120; P:ascospore-type prospore membrane assembly; IMP:PomBase.::GO:0031322; P:ascospore-type prospore-specific spindle pole body remodeling; IMP:PomBase.::GO:0007135; P:meiosis II; TAS:PomBase.::GO:0006998; P:nuclear envelope organization; IMP:PomBase.::GO:0060903; P:positive regulation of meiosis I; IEP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase. | 816 | Q59W50 | 363 | CWC2_CANAL Pre-mRNA-splicing factor CWC2 OS=C... | 111 | 0.14 | 38.1 | 27 | 44 | GO:0000974; C:Prp19 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0045787; P:positive regulation of cell cycle; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; ISS:UniProtKB. | 817 | Q9D8T7 | 112 | SLIRP_MOUSE SRA stem-loop-interacting RNA-bin... | 43 | 0.15 | 35.8 | 42 | 58 | GO:0005739; C:mitochondrion; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 818 | Q6FUS6 | 396 | NOP12_CANGA Nucleolar protein 12 OS=NRRL Y-65... | 59 | 5.1 | 33.1 | 32 | 58 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 819 | Q6NVP7 | 296 | PABP2_XENTR Polyadenylate-binding protein 2 O... | 76 | 0.15 | 37.7 | 26 | 47 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 820 | Q00916 | 300 | RU17_YEAST U1 small nuclear ribonucleoprotein... | 78 | 0.16 | 37.7 | 28 | 53 | GO:0000243; C:commitment complex; IPI:SGD.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; IPI:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0030619; F:U1 snRNA binding; IPI:SGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD. | 821 | B4G3E2 | 276 | EI3G2_DROPE Eukaryotic translation initiation... | 73 | 0.16 | 37.7 | 26 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 822 | P17132 | 158 | HNRPC_RAT Heterogeneous nuclear ribonucleopro... | 89 | 0.17 | 36.6 | 25 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 823 | Q6DCB7 | 371 | DND1_XENLA Dead end protein homolog 1 OS=Xeno... | 72 | 0.17 | 37.7 | 32 | 50 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0060965; P:negative regulation of gene silencing by miRNA; ISS:UniProtKB. | 824 | B3R5Q1 | 216 | KYNB_CUPTR Kynurenine formamidase OS=(strain ... | 44 | 0.19 | 37 | 45 | 59 | | | | | | | | | | | GO:0004061; F:arylformamidase activity; ISS:UniProtKB.::GO:0004328; F:formamidase activity; IEA:InterPro. | | | | | | | | | | GO:0043420; P:anthranilate metabolic process; ISS:UniProtKB.::GO:0019441; P:tryptophan catabolic process to kynurenine; ISS:UniProtKB. | 825 | E1BC15 | 1051 | RBM44_BOVIN RNA-binding protein 44 OS=Bos tau... | 103 | 0.2 | 38.1 | 24 | 52 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0045171; C:intercellular bridge; ISS:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB. | | | | | | | | | | | 826 | Q0K7X9 | 216 | KYNB_CUPNH Kynurenine formamidase OS=(Ralston... | 77 | 0.2 | 37 | 36 | 47 | | | | | | | | | | | GO:0004061; F:arylformamidase activity; ISS:UniProtKB.::GO:0004328; F:formamidase activity; IEA:InterPro. | | | | | | | | | | GO:0043420; P:anthranilate metabolic process; ISS:UniProtKB.::GO:0019441; P:tryptophan catabolic process to kynurenine; ISS:UniProtKB. | 827 | Q9VWD4 | 580 | Y4230_DROME Probable RNA-binding protein CG14... | 75 | 0.2 | 37.7 | 27 | 51 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 828 | Q5U1W5 | 244 | U1SBP_RAT U11/U12 small nuclear ribonucleopro... | 57 | 0.22 | 37 | 28 | 47 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 829 | Q32LC7 | 465 | G3BP1_BOVIN Ras GTPase-activating protein-bin... | 104 | 0.23 | 37.4 | 27 | 45 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006810; P:transport; IEA:UniProtKB-KW. | 830 | B4P5F7 | 690 | EIF3B_DROYA Eukaryotic translation initiation... | 62 | 0.24 | 37.7 | 32 | 56 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:UniProtKB. | 831 | Q9SD61 | 352 | C3H42_ARATH Zinc finger CCCH domain-containin... | 106 | 3.8 | 33.5 | 21 | 52 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 832 | Q15424 | 915 | SAFB1_HUMAN Scaffold attachment factor B1 OS=... | 114 | 0.25 | 37.7 | 18 | 47 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006325; P:chromatin organization; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 833 | Q9SJG8 | 843 | AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis... | 88 | 0.25 | 37.7 | 27 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB. | 834 | O13829 | 261 | RU17_SCHPO U1 small nuclear ribonucleoprotein... | 132 | 0.25 | 37 | 21 | 42 | GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030619; F:U1 snRNA binding; ISS:PomBase. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase. | 835 | Q9UPN6 | 1271 | SCAF8_HUMAN Protein SCAF8 OS=Homo sapiens (Hu... | 73 | 0.25 | 37.7 | 25 | 47 | GO:0016363; C:nuclear matrix; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043175; F:RNA polymerase core enzyme binding; IPI:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 836 | Q8SWL2 | 163 | Y184_ENCCU RRM-domain-containing protein ECU0... | 42 | 0.26 | 36.2 | 29 | 67 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 837 | Q54WM4 | 233 | EIF3G_DICDI Eukaryotic translation initiation... | 74 | 1.1 | 34.7 | 27 | 50 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:dictyBase. | 838 | Q13148 | 414 | TADBP_HUMAN TAR DNA-binding protein 43 OS=Hom... | 230 | 9.6 | 32.3 | 23 | 41 | GO:0005634; C:nucleus; IDA:BHF-UCL. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:BHF-UCL.::GO:0003730; F:mRNA 3'-UTR binding; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; IDA:BHF-UCL.::GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043922; P:negative regulation by host of viral transcription; IDA:BHF-UCL.::GO:0008380; P:RNA splicing; IDA:BHF-UCL.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc. | 839 | Q5R5W2 | 414 | TADBP_PONAB TAR DNA-binding protein 43 OS=Pon... | 230 | 8.9 | 32.3 | 23 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 840 | Q24491 | 197 | RX21_DROME RNA-binding protein Rsf1 OS=Drosop... | 72 | 0.86 | 35 | 29 | 49 | GO:0005634; C:nucleus; IDA:FlyBase. | | | | | | | | | | GO:0003729; F:mRNA binding; TAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; TAS:FlyBase. | 841 | B4NFY1 | 268 | EI3G2_DROWI Eukaryotic translation initiation... | 80 | 2.6 | 33.9 | 20 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |