Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL006W
Length:
303
Number of sequences:
5887
Description:
YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901Q5RKI0    606   WDR1_RAT WD repeat-containing protein 1 OS=Ra...1600.009     41.2     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
902Q75BS2    295   SEC13_ASHGO Protein transport protein SEC13 O...810.012     40.4     37     51GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
903Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...1032     33.9     27     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
904Q6NYH1    1187   IF122_DANRE Intraflagellar transport protein ...2800.0002     46.6     20     36GO:0005929; C:cilium; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
GO:0048593; P:camera-type eye morphogenesis; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0010172; P:embryonic body morphogenesis; IMP:UniProtKB.::GO:0007507; P:heart development; IMP:UniProtKB.::GO:0008589; P:regulation of smoothened signaling pathway; IMP:UniProtKB.::GO:0072001; P:renal system development; IMP:UniProtKB.
905O14186    846   YDSB_SCHPO Uncharacterized WD repeat-containi...1510.001     44.3     25     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005778; C:peroxisomal membrane; NAS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
906Q8VZS9    475   FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabido...1030.16     37     24     46GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0032877; P:positive regulation of DNA endoreduplication; IMP:TAIR.
907Q04305    513   UTP15_YEAST U3 small nucleolar RNA-associated...1560.0002     46.2     28     46GO:0033553; C:rDNA heterochromatin; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.::GO:0034455; C:t-UTP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
908B4LS78    419   WDR12_DROVI Ribosome biogenesis protein WDR12...970.013     40.4     27     49GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
909O45933    363   SEH1_CAEEL Nucleoporin SEH1 OS=Caenorhabditis...1660.0002     45.8     27     41GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0045132; P:meiotic chromosome segregation; IMP:WormBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
910Q9BRP4    392   PAAF1_HUMAN Proteasomal ATPase-associated fac...1151.2     34.3     22     42GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
911Q5BJ90    423   WDR12_XENTR Ribosome biogenesis protein wdr12...2500.021     40     22     40GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
912Q6PNC0    3013   DMXL1_MOUSE DmX-like protein 1 OS=Mus musculu...1978.6     32     21     41
913Q9C107    815   MCL1_SCHPO Minichromosome loss protein 1 OS=S...2640.0002     46.2     21     42GO:0005658; C:alpha DNA polymerase:primase complex; IDA:PomBase.
GO:0003682; F:chromatin binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006261; P:DNA-dependent DNA replication; IGI:PomBase.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:PomBase.::GO:0007064; P:mitotic sister chromatid cohesion; IMP:PomBase.::GO:0071459; P:protein localization to chromosome, centromeric region; IMP:PomBase.::GO:0007090; P:regulation of S phase of mitotic cell cycle; IMP:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0000723; P:telomere maintenance; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
914Q59WJ4    543   PFS2_CANAL Polyadenylation factor subunit 2 O...1320.15     37.4     20     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
915O02482    612   UNC37_CAEEL Transcription factor unc-37 OS=Ca...1010.38     36.2     23     45GO:0005634; C:nucleus; IDA:WormBase.
GO:0008134; F:transcription factor binding; IPI:WormBase.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0050770; P:regulation of axonogenesis; IMP:WormBase.::GO:0001505; P:regulation of neurotransmitter levels; IDA:WormBase.::GO:0050803; P:regulation of synapse structure and activity; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
916A4REK3    289   SEC13_MAGO7 Protein transport protein SEC13 O...2620.0002     45.4     19     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
917Q2TZG4    610   PFS2_ASPOR Polyadenylation factor subunit 2 O...657     32     34     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
918Q6BKH9    584   YD156_DEBHA WD repeat-containing protein DEHA...1750.0002     46.2     22     43
919P79083    328   EIF3I_SCHPO Eukaryotic translation initiation...552.4     33.1     31     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0016282; C:eukaryotic 43S preinitiation complex; IDA:PomBase.::GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IDA:PomBase.::GO:0071541; C:eukaryotic translation initiation factor 3 complex, eIF3m; IDA:PomBase.::GO:0034399; C:nuclear periphery; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0071470; P:cellular response to osmotic stress; IMP:PomBase.::GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
920Q7TNG5    649   EMAL2_MOUSE Echinoderm microtubule-associated...2130.18     37     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.
921Q8AVS9    457   DCA10_XENLA DDB1- and CUL4-associated factor ...1140.002     43.1     28     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
922Q8VDD9    1821   PHIP_MOUSE PH-interacting protein OS=Mus musc...3300.39     36.2     21     39GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IDA:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0043568; P:positive regulation of insulin-like growth factor receptor signaling pathway; IDA:UniProtKB.::GO:0045840; P:positive regulation of mitosis; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; ISS:UniProtKB.::GO:0001932; P:regulation of protein phosphorylation; IDA:UniProtKB.
923O75083    606   WDR1_HUMAN WD repeat-containing protein 1 OS=...1600.056     38.5     23     39GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005576; C:extracellular region; TAS:Reactome.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030168; P:platelet activation; TAS:Reactome.::GO:0002576; P:platelet degranulation; TAS:Reactome.::GO:0007605; P:sensory perception of sound; TAS:ProtInc.
924Q6DTM3    1047   AHI1_RAT Jouberin OS=Rattus norvegicus (Rat)....326.1     32.3     47     63GO:0005912; C:adherens junction; ISS:UniProtKB.::GO:0005911; C:cell-cell junction; ISS:UniProtKB.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.::GO:0036038; C:TCTN-B9D complex; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0035844; P:cloaca development; ISS:UniProtKB.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0030902; P:hindbrain development; ISS:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0071599; P:otic vesicle development; ISS:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; ISS:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; ISS:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; ISS:UniProtKB.::GO:0050795; P:regulation of behavior; ISS:UniProtKB.::GO:0010842; P:retina layer formation; ISS:UniProtKB.::GO:0065001; P:specification of axis polarity; ISS:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; ISS:UniProtKB.
925Q8TDJ6    3036   DMXL2_HUMAN DmX-like protein 2 OS=Homo sapien...2530.0003     46.2     21     43GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0030672; C:synaptic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0017137; F:Rab GTPase binding; IDA:MGI.
926Q5ZK69    392   PAAF1_CHICK Proteasomal ATPase-associated fac...1180.47     35.4     22     42GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
927Q9Y485    3027   DMXL1_HUMAN DmX-like protein 1 OS=Homo sapien...1973.1     33.5     22     41
928Q9BQ67    446   GRWD1_HUMAN Glutamate-rich WD repeat-containi...1190.0003     45.8     29     47GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
929A7RM20    321   EIF3I_NEMVE Eukaryotic translation initiation...1073.6     32.7     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
930Q6FKK3    457   YTM1_CANGA Ribosome biogenesis protein YTM1 O...1040.041     38.9     31     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
931Q68FJ6    363   PK1IP_XENLA p21-activated protein kinase-inte...1191.3     34.3     22     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
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