Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL006W
Length:
303
Number of sequences:
5887
Description:
YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871A3LNI7    524   LIS1_PICST Nuclear distribution protein PAC1 ...963.4     33.1     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
872B4Q9T6    420   WDR12_DROSI Ribosome biogenesis protein WDR12...2983.6     32.7     20     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
873Q5RB58    328   BUB3_PONAB Mitotic checkpoint protein BUB3 OS...1443.4     32.7     21     42GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051983; P:regulation of chromosome segregation; ISS:UniProtKB.::GO:0071173; P:spindle assembly checkpoint; ISS:UniProtKB.
874O43818    475   U3IP2_HUMAN U3 small nucleolar RNA-interactin...992.9     33.1     22     41GO:0030532; C:small nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005732; C:small nucleolar ribonucleoprotein complex; TAS:ProtInc.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; TAS:ProtInc.
875Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...2320.0001     46.6     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
876B5DHW4    1064   WDY_DROPS WD repeat-containing protein on Y c...1393.1     33.1     22     42
GO:0005509; F:calcium ion binding; IEA:InterPro.
877B0WYR6    1033   WDY_CULQU WD repeat-containing protein on Y c...1500.022     40     23     35
878Q9UKT8    454   FBXW2_HUMAN F-box/WD repeat-containing protei...1790.031     39.3     21     40
GO:0004842; F:ubiquitin-protein ligase activity; TAS:ProtInc.
GO:0006508; P:proteolysis; TAS:ProtInc.
879Q58D00    454   FBXW2_BOVIN F-box/WD repeat-containing protei...1790.034     39.3     21     40
880B4HWV6    420   WDR12_DROSE Ribosome biogenesis protein WDR12...2983.8     32.7     20     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
881Q96MR6    1250   WDR65_HUMAN WD repeat-containing protein 65 O...2350.0001     47     18     41
882O42860    320   BUB3_SCHPO Mitotic checkpoint protein bub3 OS...2240.0001     46.2     25     38GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IMP:PomBase.
883B3M1G0    481   WDR55_DROAN WD repeat-containing protein 55 h...1217.8     32     21     42
884Q9URY0    440   YTM1_SCHPO Ribosome biogenesis protein ytm1 O...2405.3     32.3     20     35GO:0015630; C:microtubule cytoskeleton; ISS:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0016043; P:cellular component organization; NAS:PomBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
885Q9NSI6    2320   BRWD1_HUMAN Bromodomain and WD repeat-contain...961.6     34.3     25     44GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
886Q5BIM8    397   ERCC8_BOVIN DNA excision repair protein ERCC-...2880.16     37     21     39GO:0005625; C:soluble fraction; ISS:UniProtKB.
GO:0032403; F:protein complex binding; ISS:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0006979; P:response to oxidative stress; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:UniProtKB.
887Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...1560.32     36.2     23     40
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
888Q54MZ3    499   CDC20_DICDI Anaphase-promoting complex subuni...1420.055     38.5     23     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
889Q6FVD3    840   HIR1_CANGA Protein HIR1 OS=NRRL Y-65) (Yeast)...1790.013     40.8     24     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
890Q59VP7    849   ERB1_CANAL Ribosome biogenesis protein ERB1 O...990.0002     46.6     24     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
891Q7ZVL2    779   WDR24_DANRE WD repeat-containing protein 24 O...3200.0002     46.6     21     37
892Q5ACW8    853   HIR1_CANAL Protein HIR1 OS=Candida albicans (...1220.13     37.7     27     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
893Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...451.1     34.7     36     56
894Q9FNZ2    430   C3H48_ARATH Zinc finger CCCH domain-containin...1540.063     38.5     25     41
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
895B7PY76    425   WDR12_IXOSC Ribosome biogenesis protein WDR12...2000.89     34.7     22     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
896Q20059    683   WDR48_CAEEL WD repeat-containing protein 48 h...2460.82     35     20     39
897O94394    369   YQF1_SCHPO Uncharacterized WD repeat-containi...1924.6     32.3     24     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
898Q6BRR2    1265   SEC31_DEBHA Protein transport protein SEC31 O...2740.0002     46.6     23     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
899Q54UI3    467   WDR4_DICDI tRNA (guanine-N(7)-)-methyltransfe...1360.91     34.7     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
900Q13216    396   ERCC8_HUMAN DNA excision repair protein ERCC-...2510.47     35.4     20     37GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000109; C:nucleotide-excision repair complex; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
901Q5RKI0    606   WDR1_RAT WD repeat-containing protein 1 OS=Ra...1600.009     41.2     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
records
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