UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL006W

Length:

303

Number of sequences:

5887

Description:

YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
721	P78972	488	SLP1_SCHPO WD repeat-containing protein slp1 ...	107	6.2	32.3	22	41	GO:0032153; C:cell division site; IDA:PomBase.::GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IGI:PomBase.
722	Q9R1A8	733	RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...	228	0.088	38.1	21	40	GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
723	O94319	297	SEC13_SCHPO Protein transport protein sec13 O...	263	0.000006	50.4	22	39	GO:0030127; C:COPII vesicle coat; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:PomBase.::GO:0005886; C:plasma membrane; ISS:PomBase.
									GO:0071937; P:barrier septum assembly involved in cell cycle cytokinesis; IMP:PomBase.::GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; ISS:PomBase.
724	Q8NHY2	731	RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2...	228	0.079	38.1	21	40	GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
725	B4MA12	397	WUHO_DROVI tRNA (guanine-N(7)-)-methyltransfe...	148	0.059	38.5	22	45	GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
									GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
726	O94244	430	HAT2_SCHPO Histone acetyltransferase type B s...	186	8.1	31.6	26	42	GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031511; C:Mis6-Sim4 complex; TAS:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0051382; P:kinetochore assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0034501; P:protein localization to kinetochore; IGI:PomBase.::GO:0031066; P:regulation of histone deacetylation at centromere; IMP:PomBase.
727	Q4WVS4	658	MDV1_ASPFU Mitochondrial division protein 1 O...	323	0.00005	48.1	22	39	GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
728	A8QBF3	327	EIF3I_BRUMA Eukaryotic translation initiation...	125	0.13	37.4	24	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
729	P53196	417	RPN14_YEAST 26S proteasome regulatory subunit...	100	0.012	40.4	28	46	GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
730	Q5XIG8	350	STRAP_RAT Serine-threonine kinase receptor-as...	134	0.0005	44.7	23	45	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
731	B3N534	420	WDR12_DROER Ribosome biogenesis protein WDR12...	298	0.5	35.4	21	42	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
732	Q6ZPG2	1874	WDR90_MOUSE WD repeat-containing protein 90 O...	58	4.2	33.1	26	52
733	Q9LJR3	845	SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...	322	4.1	32.7	20	39	GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
									GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
734	Q8BUB4	400	WDFY2_MOUSE WD repeat and FYVE domain-contain...	213	1	34.7	17	34
									GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
735	Q810D6	446	GRWD1_MOUSE Glutamate-rich WD repeat-containi...	132	0.00001	50.4	28	46	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
736	Q4P4R3	1017	HIR1_USTMA Protein HIR1 OS=Ustilago maydis (s...	325	0.004	42.4	23	36	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003682; F:chromatin binding; IEA:InterPro.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
737	Q5R8K2	431	CSTF1_PONAB Cleavage stimulation factor subun...	150	3.2	33.1	23	41	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
738	Q9JJA4	423	WDR12_MOUSE Ribosome biogenesis protein WDR12...	282	0.092	37.7	22	37	GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
									GO:0005515; F:protein binding; IPI:MGI.
									GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0007219; P:Notch signaling pathway; IPI:MGI.
739	Q05048	431	CSTF1_HUMAN Cleavage stimulation factor subun...	248	0.002	43.1	23	39	GO:0005654; C:nucleoplasm; TAS:Reactome.
									GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
									GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
740	Q5B563	309	SEC13_EMENI Protein transport protein sec13 O...	259	0.00001	49.7	21	40	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
									GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
741	B4JPT9	419	WDR12_DROGR Ribosome biogenesis protein WDR12...	296	8.9	31.6	18	42	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
742	Q12024	460	YTM1_YEAST Ribosome biogenesis protein YTM1 O...	101	6.7	32	27	49	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0051276; P:chromosome organization; IGI:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
743	A6ZPA9	460	YTM1_YEAS7 Ribosome biogenesis protein YTM1 O...	101	6.7	32	27	49	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
744	Q9Y1C1	664	EMAP_LYTVA 77 kDa echinoderm microtubule-asso...	208	0.002	43.5	20	36	GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
745	Q8IZU2	1322	WDR17_HUMAN WD repeat-containing protein 17 O...	233	0.01	41.2	22	39
746	A2RRU3	528	UTP15_RAT U3 small nucleolar RNA-associated p...	80	0.53	35.4	25	46	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
747	Q9R099	442	TBL2_MOUSE Transducin beta-like protein 2 OS=...	105	0.012	40.4	30	49
748	Q96P53	400	WDFY2_HUMAN WD repeat and FYVE domain-contain...	211	1.9	33.9	22	35
									GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
749	A1DDL6	658	MDV1_NEOFI Mitochondrial division protein 1 O...	297	0.002	43.1	22	37	GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
750	Q7RY68	660	PFS2_NEUCR Polyadenylation factor subunit 2 O...	99	0.11	37.7	22	47	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
751	Q8MYE8	425	PAAF1_DICDI Probable proteasomal ATPase-assoc...	162	0.86	34.7	22	44	GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.

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