Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL006W
Length:
303
Number of sequences:
5887
Description:
YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...1990.006     41.6     21     36
572Q5BLX8    315   WDR83_RAT WD repeat domain-containing protein...2310.009     40.8     19     39GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
573Q9C1X0    297   YN55_SCHPO Uncharacterized WD repeat-containi...720.38     35.8     22     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
574Q9DC48    579   PRP17_MOUSE Pre-mRNA-processing factor 17 OS=...1470.008     41.2     24     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
575Q80ZD0    353   GBB5_TAMST Guanine nucleotide-binding protein...520.48     35.4     27     56
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
576Q5RDY7    353   GBB5_PONAB Guanine nucleotide-binding protein...520.49     35.4     27     56
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
577Q13033    797   STRN3_HUMAN Striatin-3 OS=Homo sapiens (Human...2340.025     40     21     37GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:UniProtKB.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.::GO:0043234; C:protein complex; ISS:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0032355; P:response to estradiol stimulus; ISS:UniProtKB.
578Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...3090.0000003     55.1     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
579O60508    579   PRP17_HUMAN Pre-mRNA-processing factor 17 OS=...1470.008     41.2     24     47GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
580Q5RD21    944   WDR67_PONAB WD repeat-containing protein 67 O...1510.0000003     55.5     25     48GO:0005622; C:intracellular; IEA:InterPro.
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
581Q96DN5    1066   WDR67_HUMAN WD repeat-containing protein 67 O...1660.0000003     55.5     23     47GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0005622; C:intracellular; IEA:InterPro.
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
582O14775    395   GBB5_HUMAN Guanine nucleotide-binding protein...520.52     35.4     27     56GO:0005834; C:heterotrimeric G-protein complex; NAS:UniProtKB.
GO:0003924; F:GTPase activity; NAS:UniProtKB.::GO:0004871; F:signal transducer activity; NAS:UniProtKB.
583P62882    353   GBB5_RAT Guanine nucleotide-binding protein s...520.48     35.4     27     56GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:RGD.
584B3RNR8    313   CIAO1_TRIAD Probable cytosolic iron-sulfur pr...1640.022     39.7     24     45
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
585Q6CB13    565   MDV1_YARLI Mitochondrial division protein 1 O...2940.003     42.7     21     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
586P0CS32    341   EIF3I_CRYNJ Eukaryotic translation initiation...1344.9     32.3     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
587P0CS33    341   EIF3I_CRYNB Eukaryotic translation initiation...1344.9     32.3     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
588C5DF48    457   LIS1_LACTC Nuclear distribution protein PAC1 ...1880.79     35     21     35GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
589B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...1220.054     38.5     25     45
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
590Q6C414    1184   SEC31_YARLI Protein transport protein SEC31 O...1550.047     39.3     25     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
591Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...2550.0005     45.1     24     38GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
592Q6BVZ3    504   PFS2_DEBHA Polyadenylation factor subunit 2 O...1540.008     41.2     21     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
593Q6CSZ5    302   SEC13_KLULA Protein transport protein SEC13 O...810.001     43.5     38     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
594Q9QXL1    1668   KI21B_MOUSE Kinesin-like protein KIF21B OS=Mu...2670.002     43.5     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
595Q9R037    908   WDR44_RAT WD repeat-containing protein 44 OS=...1960.26     36.6     21     41GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IDA:RGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.
GO:0017137; F:Rab GTPase binding; IDA:RGD.
GO:0030334; P:regulation of cell migration; IMP:RGD.
596P07834    779   CDC4_YEAST Cell division control protein 4 OS...990.002     43.1     31     46GO:0016363; C:nuclear matrix; IDA:SGD.::GO:0043224; C:nuclear SCF ubiquitin ligase complex; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IGI:SGD.::GO:0007126; P:meiosis; IMP:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
597P62881    395   GBB5_MOUSE Guanine nucleotide-binding protein...520.49     35.4     27     56GO:0005634; C:nucleus; IDA:MGI.::GO:0005886; C:plasma membrane; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IDA:MGI.
598Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...471.6     33.9     36     51GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
599Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...3240.0007     44.3     21     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
600A5DGL8    348   EIF3I_PICGU Eukaryotic translation initiation...501.6     33.9     36     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
601P90587    601   WD66_PHYPO 66 kDa stress protein OS=Physarum ...2250.018     40.4     18     37
records
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