Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL006W
Length:
303
Number of sequences:
5887
Description:
YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511P53621    1224   COPA_HUMAN Coatomer subunit alpha OS=Homo sap...2090.002     43.1     23     40GO:0030126; C:COPI vesicle coat; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005615; C:extracellular space; IDA:MGI.::GO:0005792; C:microsome; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005179; F:hormone activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0030157; P:pancreatic juice secretion; IDA:MGI.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:Reactome.
512O76071    339   CIAO1_HUMAN Probable cytosolic iron-sulfur pr...821.9     33.5     32     45GO:0071817; C:MMXD complex; IDA:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; IGI:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
513Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...821.7     33.9     32     45GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
514Q93794    587   SEL10_CAEEL F-box/WD repeat-containing protei...820.008     41.2     33     49GO:0030424; C:axon; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0046660; P:female sex differentiation; IMP:UniProtKB.::GO:0045746; P:negative regulation of Notch signaling pathway; IGI:UniProtKB.
515Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...1070.00002     49.3     31     50
516P54319    795   PLAP_RAT Phospholipase A-2-activating protein...940.011     40.8     30     43
517Q758R7    715   MDV1_ASHGO Mitochondrial division protein 1 O...1660.0000004     55.1     27     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
518Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...2830.0000003     55.1     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
519Q2UG43    294   SEC13_ASPOR Protein transport protein sec13 O...2590.00000002     58.2     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
520Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...1850.001     43.1     21     43
521Q9Y263    795   PLAP_HUMAN Phospholipase A-2-activating prote...940.006     42     31     43
GO:0016005; F:phospholipase A2 activator activity; TAS:ProtInc.
GO:0006644; P:phospholipid metabolic process; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
522Q5TAQ9    597   DCAF8_HUMAN DDB1- and CUL4-associated factor ...2640.00000003     58.2     23     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
523Q5XX13    1052   FBW10_HUMAN F-box/WD repeat-containing protei...1803.3     33.1     19     42
524Q29RH4    351   THOC3_BOVIN THO complex subunit 3 OS=Bos taur...1143.7     32.7     20     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
525Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...2220.0000002     55.8     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
526Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...1143.4     32.7     20     42
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
527Q24371    769   L2DTL_DROME Protein lethal(2)denticleless OS=...3030.00000004     58.2     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
528P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...1520.034     38.9     22     39GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
529Q5U2M6    591   DCAF8_RAT DDB1- and CUL4-associated factor 8 ...2640.00000004     57.8     23     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
530Q17BB0    427   WDR12_AEDAE Ribosome biogenesis protein WDR12...903.4     33.1     27     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
531Q4WNK7    306   SEC13_ASPFU Protein transport protein sec13 O...2560.00000005     57     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
532Q8N7N5    591   DCAF8_MOUSE DDB1- and CUL4-associated factor ...2640.00000005     57.4     23     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
533Q0CHM0    309   SEC13_ASPTN Protein transport protein sec13 O...2590.00000006     56.6     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
534P70483    780   STRN_RAT Striatin OS=Rattus norvegicus (Rat)....1201.3     34.3     21     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0014069; C:postsynaptic density; IDA:RGD.::GO:0045211; C:postsynaptic membrane; IDA:RGD.
GO:0048306; F:calcium-dependent protein binding; NAS:RGD.::GO:0005516; F:calmodulin binding; IDA:RGD.
GO:0016358; P:dendrite development; IMP:RGD.::GO:0007626; P:locomotory behavior; IMP:RGD.
535Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...2780.0003     45.8     20     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
536Q96J01    351   THOC3_HUMAN THO complex subunit 3 OS=Homo sap...1143.4     32.7     20     42GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
537Q759L2    346   EIF3I_ASHGO Eukaryotic translation initiation...810.23     36.6     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
538A5D7H2    797   STRN3_BOVIN Striatin-3 OS=Bos taurus (Bovine)...2340.012     40.8     22     38GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
539Q5XGI5    314   WDR83_XENTR WD repeat domain-containing prote...511.7     33.9     31     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
540Q54QU5    359   WDR89_DICDI WD repeat-containing protein 89 h...1030.005     41.6     30     50
541P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...880.033     39.3     23     42GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
records
Previous ‹‹ ›› Next Total records: 1000 511 - 540
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::