Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL006W
Length:
303
Number of sequences:
5887
Description:
YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...1980.00005     48.5     24     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
452P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...1430.053     38.9     26     44GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
453Q8N0X2    631   SPG16_HUMAN Sperm-associated antigen 16 prote...2110.0004     45.4     22     40GO:0035085; C:cilium axoneme; ISS:UniProtKB.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
454Q5ZJH5    305   WDR61_CHICK WD repeat-containing protein 61 O...1420.042     38.5     27     48GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
455Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...1017.2     32     25     46GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
456Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...2960.0003     45.8     22     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
457Q5SUS0    1030   FBW10_MOUSE F-box/WD repeat-containing protei...1832.8     33.5     21     43
458P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...3040.2     37     21     37
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
459Q6DH44    315   WDR83_DANRE WD repeat domain-containing prote...470.05     38.5     38     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
460P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...2370.0000003     55.1     26     39GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
461Q39336    327   GBLP_BRANA Guanine nucleotide-binding protein...1040.00008     47     31     48
462Q9AUR7    1218   COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza...1810.003     43.1     24     42GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
463A6ZZZ8    645   CAF4_YEAS7 CCR4-associated factor 4 OS=Saccha...2370.0000003     55.5     26     39GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
464Q5R664    906   COPB2_PONAB Coatomer subunit beta' OS=Pongo a...1010.00003     48.9     31     55GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
465Q4R4I8    906   COPB2_MACFA Coatomer subunit beta' OS=Macaca ...1010.00003     48.9     31     55GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
466Q10282    305   GBB_SCHPO Guanine nucleotide-binding protein ...1330.006     41.6     26     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005834; C:heterotrimeric G-protein complex; TAS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010619; P:activation of adenylate cyclase activity by glucose-triggered G-protein signaling pathway; TAS:PomBase.::GO:0031138; P:negative regulation of conjugation with cellular fusion; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
467P35606    906   COPB2_HUMAN Coatomer subunit beta' OS=Homo sa...1010.00003     48.9     31     55GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
468P35605    906   COPB2_BOVIN Coatomer subunit beta' OS=Bos tau...1010.00003     48.9     31     55GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.
GO:0005080; F:protein kinase C binding; ISS:AgBase.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; TAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
469O55029    905   COPB2_MOUSE Coatomer subunit beta' OS=Mus mus...1010.00003     48.9     31     55
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
470A8Q2R5    660   WDR48_BRUMA WD repeat-containing protein 48 h...1521     34.7     22     41
471B0DWM8    452   YTM1_LACBS Ribosome biogenesis protein YTM1 O...1660.11     37.7     20     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
472P93339    377   GBB_NICPL Guanine nucleotide-binding protein ...2380.002     43.1     21     37GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
473O18640    318   GBLP_DROME Guanine nucleotide-binding protein...1940.001     43.9     22     36GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0042335; P:cuticle development; IMP:FlyBase.::GO:0007626; P:locomotory behavior; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0018991; P:oviposition; IMP:FlyBase.::GO:0035220; P:wing disc development; IMP:FlyBase.
474A5DHD9    290   SEC13_PICGU Protein transport protein SEC13 O...850.024     39.3     33     53GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
475Q8K450    639   SPG16_MOUSE Sperm-associated antigen 16 prote...890.0004     45.4     29     46GO:0035085; C:cilium axoneme; IDA:UniProtKB.::GO:0035086; C:flagellar axoneme; IDA:MGI.::GO:0005874; C:microtubule; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; IMP:MGI.
476P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...1390.35     35.8     24     44GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
477A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...1690.00006     47.8     25     43
478Q9AV81    527   PUB72_ORYSJ U-box domain-containing protein 7...1810.1     37.7     19     40GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
479P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...1990.000006     51.2     25     40GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
480Q4WT34    453   PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS...2830.000000008     60.1     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
481Q5RAC9    607   A16L1_PONAB Autophagy-related protein 16-1 OS...2970.088     38.1     20     35GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
records
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