Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL006W
Length:
303
Number of sequences:
5887
Description:
YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...901.4     34.3     24     41GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
422Q7PS24    341   CIAO1_ANOGA Probable cytosolic iron-sulfur pr...3160.00000004     57.4     24     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
423P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...2510.00003     48.5     21     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
424Q86TI4    376   WDR86_HUMAN WD repeat-containing protein 86 O...1430.005     42     24     44
425Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...1810.003     42.7     24     41GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
426Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...1730.028     39.7     21     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
427Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...2070.000006     50.8     25     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
428Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...1810.01     41.2     23     41GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
429P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...1910.002     43.1     23     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
430Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...2230.0005     45.4     20     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
431Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...940.31     36.2     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
432P26308    340   GBB1_DROME Guanine nucleotide-binding protein...1360.63     35     22     45GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0045176; P:apical protein localization; TAS:FlyBase.::GO:0055059; P:asymmetric neuroblast division; IMP:FlyBase.
433Q95JL5    571   WDR16_MACFA WD repeat-containing protein 16 O...2260.012     40.8     18     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
434Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...2970.11     37.7     20     35GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
435Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...2850.00002     49.7     22     39GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
436Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...1320.013     40.8     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
437Q01277    650   SCONB_NEUCR Probable E3 ubiquitin ligase comp...632.5     33.5     30     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
438P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...1990.0007     44.7     20     41
439Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...640.32     36.2     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
440O24076    325   GBLP_MEDSA Guanine nucleotide-binding protein...1040.0004     45.1     30     47
441Q7S8R5    645   MDV1_NEUCR Mitochondrial division protein 1 O...3220.000009     50.8     23     37GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
442P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...2370.75     35     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
443Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...1010.001     44.3     26     54GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
444B6K1G6    616   CFD1_SCHJY Probable cytosolic Fe-S cluster as...552.6     33.5     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
445P40217    347   EIF3I_YEAST Eukaryotic translation initiation...790.019     40     29     54GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:SGD.::GO:0043614; C:multi-eIF complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:SGD.
GO:0002188; P:translation reinitiation; IMP:SGD.
446A6ZMK5    347   EIF3I_YEAS7 Eukaryotic translation initiation...790.019     40     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
447Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...960.25     36.2     28     50
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
448Q12220    943   UTP12_YEAST U3 small nucleolar RNA-associated...1180.003     43.1     24     52GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
449P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...2370.85     35     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
450Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...990.0001     47.4     33     47
451Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...1980.00005     48.5     24     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
records
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