Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL006W
Length:
303
Number of sequences:
5887
Description:
YNL006W LST8 SGDID:S000004951, Chr XIV from 620067-620978, Genome Release 64-1-1, Verified ORF, "Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...1002.3     33.5     25     40GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
332Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...1002.3     33.5     25     40GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
333Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...1001.9     33.9     25     40GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
334Q2KID6    513   PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos ta...520.29     36.2     31     54GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
335B0X2V9    670   WDR48_CULQU WD repeat-containing protein 48 h...1890.0001     47.4     20     41
336Q54SF9    941   MHCKD_DICDI Myosin heavy chain kinase D OS=Di...2400.0002     47     21     40
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; ISS:dictyBase.
GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.
337Q922V4    513   PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus mu...1880.00002     49.7     25     44GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
338Q09855    506   POF11_SCHPO F-box/WD repeat-containing protei...2390.034     39.3     20     39GO:0005829; C:cytosol; IDA:PomBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
339B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...1742.8     33.1     24     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
340Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...1723.8     32.7     24     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
341Q9C4Z6    326   GPLPB_ARATH Guanine nucleotide-binding protei...1040.00004     48.1     32     52GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
342Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...2370.00000001     59.3     25     42
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
343Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...2040.008     41.6     21     40
344Q9UNX4    943   WDR3_HUMAN WD repeat-containing protein 3 OS=...1720.003     43.1     24     40GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
345Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...2040.00001     50.4     24     42
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
346B2B766    468   LIS12_PODAN Nuclear distribution protein PAC1...3070.00000000009     65.9     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
347Q8VBV4    629   FBXW7_MOUSE F-box/WD repeat-containing protei...1110.0000001     56.2     31     57GO:0005783; C:endoplasmic reticulum; IDA:MGI.::GO:0005794; C:Golgi apparatus; IDA:MGI.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0048471; C:perinuclear region of cytoplasm; IDA:BHF-UCL.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0007219; P:Notch signaling pathway; IDA:MGI.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
348B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...1660.46     35.4     23     34
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
349A7EKM8    458   LIS1_SCLS1 Nuclear distribution protein PAC1 ...2440.000000002     61.2     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
350Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...1030.004     42.4     22     46GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
351Q6DDI6    1089   WDR67_XENLA WD repeat-containing protein 67 O...1240.00000000002     68.2     32     52GO:0005622; C:intracellular; IEA:InterPro.
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
352Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...2420.00000006     57     24     41GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
353Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...670.29     36.2     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
354Q9UMS4    504   PRP19_HUMAN Pre-mRNA-processing factor 19 OS=...1003.2     33.1     25     40GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:BHF-UCL.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; IMP:BHF-UCL.
355P17343    340   GBB1_CAEEL Guanine nucleotide-binding protein...1370.077     38.1     23     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.
356Q61ZF6    340   GBB1_CAEBR Guanine nucleotide-binding protein...1370.077     38.1     23     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
357P20484    468   MAK11_YEAST Protein MAK11 OS=Saccharomyces ce...1290.016     40.4     26     43GO:0005624; C:membrane fraction; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
358Q6L4F8    336   GBLPB_ORYSJ Guanine nucleotide-binding protei...1470.002     43.1     25     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
359B8M0Q1    459   LIS1_TALSN Nuclear distribution protein nudF ...2460.0001     46.6     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
360Q969H0    707   FBXW7_HUMAN F-box/WD repeat-containing protei...1110.0000002     55.8     31     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0043234; C:protein complex; IDA:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034644; P:cellular response to UV; IDA:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0055088; P:lipid homeostasis; ISS:BHF-UCL.::GO:0032876; P:negative regulation of DNA endoreduplication; IMP:BHF-UCL.::GO:2000346; P:negative regulation of hepatocyte proliferation; ISS:BHF-UCL.::GO:0045746; P:negative regulation of Notch signaling pathway; ISS:BHF-UCL.::GO:2000639; P:negative regulation of SREBP-mediated signaling pathway; ISS:BHF-UCL.::GO:0010868; P:negative regulation of triglyceride biosynthetic process; ISS:BHF-UCL.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045741; P:positive regulation of epidermal growth factor-activated receptor activity; IDA:BHF-UCL.::GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IMP:BHF-UCL.::GO:2000060; P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:BHF-UCL.::GO:0050821; P:protein stabilization; IDA:BHF-UCL.::GO:0016567; P:protein ubiquitination; IDA:UniProtKB.::GO:0010883; P:regulation of lipid storage; ISS:BHF-UCL.::GO:0032880; P:regulation of protein localization; ISS:BHF-UCL.::GO:0006974; P:response to DNA damage stimulus; IDA:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0007062; P:sister chromatid cohesion; IMP:BHF-UCL.::GO:0001944; P:vasculature development; TAS:BHF-UCL.
361Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...1720.036     39.3     23     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
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