rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
271 | Q920Q6 | 346 | MSI2H_MOUSE RNA-binding protein Musashi homol... | 60 | 0.005 | 42.7 | 37 | 57 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005844; C:polysome; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:MGI. | | | | | | | | | | GO:0048864; P:stem cell development; IMP:UniProtKB. | 272 | Q96DH6 | 328 | MSI2H_HUMAN RNA-binding protein Musashi homol... | 60 | 0.004 | 42.7 | 37 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 273 | Q99729 | 332 | ROAA_HUMAN Heterogeneous nuclear ribonucleopr... | 183 | 0.002 | 43.9 | 20 | 45 | GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0005634; C:nucleus; ISS:HGNC.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0001837; P:epithelial to mesenchymal transition; ISS:HGNC.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:HGNC. | 274 | B7P877 | 152 | NCBP2_IXOSC Nuclear cap-binding protein subun... | 61 | 0.14 | 36.6 | 31 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 275 | Q9VWD4 | 580 | Y4230_DROME Probable RNA-binding protein CG14... | 76 | 0.002 | 44.3 | 36 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 276 | Q75AP6 | 466 | RRT5_ASHGO Regulator of rDNA transcription pr... | 82 | 0.002 | 44.3 | 32 | 51 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 277 | Q9LEB3 | 428 | RBP47_NICPL Polyadenylate-binding protein RBP... | 300 | 0.013 | 41.2 | 22 | 38 | GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 278 | O14102 | 335 | SAP49_SCHPO Spliceosome-associated protein 49... | 80 | 0.34 | 36.6 | 30 | 49 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase. | 279 | Q22037 | 346 | ROA1_CAEEL Heterogeneous nuclear ribonucleopr... | 181 | 0.002 | 43.9 | 25 | 43 | GO:0000781; C:chromosome, telomeric region; IDA:WormBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0031581; P:hemidesmosome assembly; IGI:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase. | 280 | Q9LEB4 | 409 | RBP45_NICPL Polyadenylate-binding protein RBP... | 179 | 0.002 | 43.9 | 24 | 41 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 281 | Q8VXZ9 | 425 | R47BP_ARATH Polyadenylate-binding protein RBP... | 195 | 0.051 | 39.7 | 24 | 41 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 282 | Q54KR9 | 234 | NCBP2_DICDI Nuclear cap-binding protein subun... | 73 | 0.12 | 37.7 | 30 | 53 | GO:0005846; C:nuclear cap binding complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000339; F:RNA cap binding; ISS:dictyBase. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase. | 283 | Q24491 | 197 | RX21_DROME RNA-binding protein Rsf1 OS=Drosop... | 82 | 0.003 | 42.4 | 30 | 48 | GO:0005634; C:nucleus; IDA:FlyBase. | | | | | | | | | | GO:0003729; F:mRNA binding; TAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; TAS:FlyBase. | 284 | Q9JJW6 | 218 | REFP2_MOUSE RNA and export factor-binding pro... | 85 | 0.075 | 38.5 | 28 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.::GO:0003697; F:single-stranded DNA binding; IDA:MGI. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 285 | P70318 | 392 | TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus (... | 260 | 0.003 | 43.1 | 21 | 36 | GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0017091; F:AU-rich element binding; IDA:MGI.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0007281; P:germ cell development; IMP:MGI.::GO:0008284; P:positive regulation of cell proliferation; IMP:MGI.::GO:0017145; P:stem cell division; IMP:MGI. | 286 | P41891 | 500 | GAR2_SCHPO Protein gar2 OS=Schizosaccharomyce... | 71 | 0.029 | 40.4 | 30 | 55 | GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:PomBase. | | | | | | | | | | GO:0007000; P:nucleolus organization; IMP:PomBase.::GO:0006364; P:rRNA processing; IMP:PomBase. | 287 | A1A5R1 | 432 | RFOX2_RAT RNA binding protein fox-1 homolog 2... | 60 | 0.14 | 38.1 | 32 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; ISS:UniProtKB.::GO:0008134; F:transcription factor binding; ISS:UniProtKB. | | | | | | | | | | GO:0030520; P:intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 288 | Q5RC41 | 669 | RBM14_PONAB RNA-binding protein 14 OS=Pongo a... | 177 | 0.003 | 43.5 | 24 | 39 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 289 | Q8BP71 | 449 | RFOX2_MOUSE RNA binding protein fox-1 homolog... | 60 | 0.13 | 38.1 | 32 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; ISS:UniProtKB.::GO:0008134; F:transcription factor binding; ISS:UniProtKB. | | | | | | | | | | GO:0030520; P:intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:BHF-UCL.::GO:0010724; P:regulation of definitive erythrocyte differentiation; IDA:BHF-UCL.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 290 | Q6DJI9 | 218 | ZCRB1_XENLA Zinc finger CCHC-type and RNA-bin... | 72 | 0.48 | 35.8 | 26 | 47 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 291 | Q5EA36 | 669 | RBM14_BOVIN RNA-binding protein 14 OS=Bos tau... | 177 | 0.004 | 43.5 | 24 | 39 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 292 | P07909 | 365 | ROA1_DROME Heterogeneous nuclear ribonucleopr... | 181 | 0.004 | 43.1 | 23 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0033119; P:negative regulation of RNA splicing; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 293 | O43347 | 362 | MSI1H_HUMAN RNA-binding protein Musashi homol... | 61 | 0.007 | 42 | 39 | 59 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0007399; P:nervous system development; TAS:ProtInc. | 294 | Q96PK6 | 669 | RBM14_HUMAN RNA-binding protein 14 OS=Homo sa... | 177 | 0.004 | 43.5 | 24 | 39 | GO:0016592; C:mediator complex; NAS:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; TAS:UniProtKB.::GO:0005667; C:transcription factor complex; IPI:UniProtKB. | | | | | | | | | | GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030674; F:protein binding, bridging; NAS:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0001104; F:RNA polymerase II transcription cofactor activity; NAS:UniProtKB. | | | | | | | | | | GO:0006310; P:DNA recombination; NAS:UniProtKB.::GO:0006281; P:DNA repair; NAS:UniProtKB.::GO:0006260; P:DNA replication; NAS:UniProtKB.::GO:0042921; P:glucocorticoid receptor signaling pathway; NAS:UniProtKB.::GO:0016575; P:histone deacetylation; IPI:UniProtKB.::GO:0030520; P:intracellular estrogen receptor signaling pathway; NAS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0009725; P:response to hormone stimulus; TAS:UniProtKB. | 295 | Q8TBF4 | 217 | ZCRB1_HUMAN Zinc finger CCHC-type and RNA-bin... | 72 | 0.88 | 35 | 26 | 46 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005689; C:U12-type spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IC:HGNC. | 296 | Q8BZX4 | 494 | SREK1_MOUSE Splicing regulatory glutamine/lys... | 97 | 0.004 | 43.1 | 29 | 48 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 297 | Q9VRV7 | 121 | PM14_DROME Pre-mRNA branch site p14-like prot... | 78 | 0.004 | 40.8 | 29 | 50 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase. | 298 | Q8C2Q3 | 669 | RBM14_MOUSE RNA-binding protein 14 OS=Mus mus... | 177 | 0.004 | 43.1 | 24 | 39 | GO:0005667; C:transcription factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016575; P:histone deacetylation; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 299 | Q03251 | 169 | GRP8_ARATH Glycine-rich RNA-binding protein 8... | 74 | 2.1 | 33.5 | 32 | 53 | GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005777; C:peroxisome; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045087; P:innate immune response; IDA:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IDA:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0010043; P:response to zinc ion; IEP:TAIR. | 300 | Q8WXA9 | 508 | SREK1_HUMAN Splicing regulatory glutamine/lys... | 76 | 0.005 | 43.1 | 32 | 50 | GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 301 | Q61474 | 362 | MSI1H_MOUSE RNA-binding protein Musashi homol... | 61 | 0.013 | 41.2 | 39 | 57 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005844; C:polysome; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:MGI. | | | | | | | | | | |