UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YMR290C

Length:

505

Number of sequences:

5887

Description:

YMR290C HAS1 SGDID:S000004903, Chr XIII from 851591-850074, Genome Release 64-1-1, reverse complement, Verified ORF, "ATP-dependent RNA helicase; localizes to both the nuclear periphery and nucleolus; highly enriched in nuclear pore complex fractions; constituent of 66S pre-ribosomal particles"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
361	Q4IP34	1227	PRP5_GIBZE Pre-mRNA-processing ATP-dependent ...	388	2e-53	199	32	54	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
362	P0A9P8	629	DEAD_SHIFL Cold-shock DEAD box protein A OS=S...	439	2e-53	195	32	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
363	P0A9P6	629	DEAD_ECOLI Cold-shock DEAD box protein A OS=E...	439	2e-53	195	32	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030684; C:preribosome; IDA:EcoCyc.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IDA:EcoCyc.::GO:0005515; F:protein binding; IPI:EcoCyc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0070417; P:cellular response to cold; IMP:EcoCyc.::GO:0000027; P:ribosomal large subunit assembly; IMP:EcoCyc.::GO:0006401; P:RNA catabolic process; IGI:EcoCyc.
364	P0A9P7	629	DEAD_ECOL6 Cold-shock DEAD box protein A OS=E...	439	2e-53	195	32	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
365	P24783	546	DBP2_YEAST ATP-dependent RNA helicase DBP2 OS...	371	2e-53	194	34	55	GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IPI:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.
366	A6ZRX0	546	DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS...	371	3e-53	194	34	55	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
367	A2QQA8	1180	PRP5_ASPNC Pre-mRNA-processing ATP-dependent ...	415	3e-53	199	32	53	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
368	Q6C9P3	532	DBP3_YARLI ATP-dependent RNA helicase DBP3 OS...	376	3e-53	193	36	52	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
369	Q0E3X4	627	RH35A_ORYSJ DEAD-box ATP-dependent RNA helica...	365	3e-53	195	33	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
370	Q11039	563	DEAD_MYCTU Cold-shock DEAD box protein A homo...	398	3e-53	194	32	52	GO:0005829; C:cytosol; IDA:MTBBASE.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
371	Q5GUR8	574	RHLB_XANOR ATP-dependent RNA helicase rhlB OS...	355	3e-53	194	35	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
372	Q7MGP7	435	RHLB_VIBVY ATP-dependent RNA helicase rhlB OS...	360	4e-53	191	33	55
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
373	Q0D1K3	1181	PRP5_ASPTN Pre-mRNA-processing ATP-dependent ...	415	4e-53	199	32	53	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
374	Q3YVI4	421	RHLB_SHISS ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
375	P0A8K0	421	RHLB_SHIFL ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
376	Q0SYX0	421	RHLB_SHIF8 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
377	Q1R4F9	421	RHLB_ECOUT ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
378	B6I4B6	421	RHLB_ECOSE ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
379	P0A8J8	421	RHLB_ECOLI ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IDA:EcoCyc.
380	B1IWC0	421	RHLB_ECOLC ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
381	P0A8J9	421	RHLB_ECOL6 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
382	Q0TAU3	421	RHLB_ECOL5 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
383	A1AHV0	421	RHLB_ECOK1 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
384	A8A6N4	421	RHLB_ECOHS ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
385	B1X9Z4	421	RHLB_ECODH ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
386	C4ZZ48	421	RHLB_ECOBW ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
387	B7M5C7	421	RHLB_ECO8A ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
388	B7MR01	421	RHLB_ECO81 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
389	B7L8B6	421	RHLB_ECO55 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
390	B7MGJ1	421	RHLB_ECO45 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
391	B7UMN5	421	RHLB_ECO27 ATP-dependent RNA helicase rhlB OS...	355	4e-53	191	34	54
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.

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