Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR287C
Length:
969
Number of sequences:
5887
Description:
YMR287C DSS1 SGDID:S000004900, Chr XIII from 845345-842436, Genome Release 64-1-1, reverse complement, Verified ORF, "3'-5' exoribonuclease, component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p; the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q9CH00    817   RNR1_LACLA Ribonuclease R 1 OS=lactis). GN=rn...3510.00000000006     70.1     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
62Q1LTG8    645   RNB_BAUCH Exoribonuclease 2 OS=Baumannia cica...3460.00000000007     69.7     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
63O14040    927   DIS3L_SCHPO Dis3-like exonuclease C2C4.07c OS...3780.00000000007     70.1     25     42GO:0005829; C:cytosol; IDA:PomBase.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0033554; P:cellular response to stress; IEP:PomBase.
64A6VN85    659   RNB_ACTSZ Exoribonuclease 2 OS=Actinobacillus...4330.00000000008     69.7     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
65Q1RC77    644   RNB_ECOUT Exoribonuclease 2 OS=Escherichia co...3540.0000000002     68.2     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
66Q4QJL5    659   RNB_HAEI8 Exoribonuclease 2 OS=Haemophilus in...4070.0000000003     67.8     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
67C6DK05    644   RNB_PECCP Exoribonuclease 2 OS=Pectobacterium...3500.0000000003     67.8     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
68B5BIE3    644   RNB_SALPK Exoribonuclease 2 OS=Salmonella par...3520.0000000003     67.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
69Q5PCZ6    644   RNB_SALPA Exoribonuclease 2 OS=Salmonella par...3520.0000000003     67.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
70B4T6U4    644   RNB_SALNS Exoribonuclease 2 OS=Salmonella new...3520.0000000003     67.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
71Q2NST6    644   RNB_SODGM Exoribonuclease 2 OS=Sodalis glossi...3490.0000000003     67.4     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
72P44440    659   RNB_HAEIN Exoribonuclease 2 OS=Haemophilus in...3690.0000000004     67.4     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
73A2RV18    1057   DI3L1_DANRE DIS3-like exonuclease 1 OS=Danio ...4630.0000000004     67.8     23     40GO:0000177; C:cytoplasmic exosome (RNase complex); ISS:UniProtKB.
GO:0000175; F:3'-5'-exoribonuclease activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74Q0V9R3    834   DI3L2_XENTR DIS3-like exonuclease 2 OS=Xenopu...4500.0000000006     67     24     40
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75B7N4A3    644   RNB_ECOLU Exoribonuclease 2 OS=Escherichia co...3540.0000000006     66.6     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
76B5R9Y0    644   RNB_SALG2 Exoribonuclease 2 OS=Salmonella gal...3520.0000000007     66.6     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
77B4TJI0    644   RNB_SALHS Exoribonuclease 2 OS=Salmonella hei...3520.0000000008     66.6     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
78B5FU93    644   RNB_SALDC Exoribonuclease 2 OS=Salmonella dub...3520.0000000008     66.6     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
79B7UR96    644   RNB_ECO27 Exoribonuclease 2 OS=Escherichia co...3540.0000000008     66.2     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
80Q8FHT6    644   RNB_ECOL6 Exoribonuclease 2 OS=Escherichia co...3540.0000000008     66.2     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
81Q0TI78    644   RNB_ECOL5 Exoribonuclease 2 OS=Escherichia co...3540.0000000008     66.2     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
82A1AAQ4    644   RNB_ECOK1 Exoribonuclease 2 OS=Escherichia co...3540.0000000008     66.2     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
83B7MLW3    644   RNB_ECO45 Exoribonuclease 2 OS=Escherichia co...3540.0000000008     66.2     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
84B4TX11    644   RNB_SALSV Exoribonuclease 2 OS=Salmonella sch...3520.0000000008     66.2     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
85B5F571    644   RNB_SALA4 Exoribonuclease 2 OS=Salmonella ago...3520.0000000008     66.2     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
86O67834    705   RNR_AQUAE Ribonuclease R OS=Aquifex aeolicus ...4240.0000000009     66.2     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
87Q8ZP54    644   RNB_SALTY Exoribonuclease 2 OS=Salmonella typ...3520.0000000009     66.2     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
88A9MWU8    644   RNB_SALPB Exoribonuclease 2 OS=Salmonella par...3520.0000000009     66.2     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
89C0Q3R1    644   RNB_SALPC Exoribonuclease 2 OS=Salmonella par...3520.000000001     66.2     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
90Q57NV9    644   RNB_SALCH Exoribonuclease 2 OS=Salmonella cho...3520.000000001     66.2     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
91A5UFG3    659   RNB_HAEIG Exoribonuclease 2 OS=Haemophilus in...3710.000000001     66.2     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
records
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