UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YMR287C

Length:

969

Number of sequences:

5887

Description:

YMR287C DSS1 SGDID:S000004900, Chr XIII from 845345-842436, Genome Release 64-1-1, reverse complement, Verified ORF, "3'-5' exoribonuclease, component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p; the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
31	B2VKS8	647	RNB_ERWT9 Exoribonuclease 2 OS=Erwinia tasman...	427	0.0000000000005	76.6	22	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
32	B1JKP2	644	RNB_YERPY Exoribonuclease 2 OS=Yersinia pseud...	347	0.0000000000005	76.6	23	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
33	D0Z8E6	647	RNB_EDWTE Exoribonuclease 2 OS=Edwardsiella t...	347	0.0000000000006	76.3	23	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
34	P40611	835	RNR_VIBPA Ribonuclease R OS=Vibrio parahaemol...	367	0.000000000001	75.9	26	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0016070; P:RNA metabolic process; IEA:InterPro.
35	A8GF49	644	RNB_SERP5 Exoribonuclease 2 OS=Serratia prote...	422	0.000000000001	75.5	23	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
36	P21499	813	RNR_ECOLI Ribonuclease R OS=Escherichia coli ...	358	0.000000000001	75.5	25	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IDA:EcoCyc.::GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0016556; P:mRNA modification; IDA:EcoCyc.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0000154; P:rRNA modification; IDA:EcoCyc.
37	Q17632	961	RRP44_CAEEL Probable exosome complex exonucle...	466	0.000000000001	75.5	25	38	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
38	A7FI01	644	RNB_YERP3 Exoribonuclease 2 OS=Yersinia pseud...	345	0.000000000002	75.1	22	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
39	C3LW69	678	RNB_VIBCM Exoribonuclease 2 OS=Vibrio cholera...	405	0.000000000002	75.1	26	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
40	Q9KLE1	678	RNB_VIBCH Exoribonuclease 2 OS=Vibrio cholera...	405	0.000000000002	75.1	26	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
41	A1JM34	644	RNB_YERE8 Exoribonuclease 2 OS=Yersinia enter...	413	0.000000000002	74.7	23	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
42	Q6D5S7	644	RNB_ERWCT Exoribonuclease 2 OS=BAA-672) (Pect...	426	0.000000000002	74.3	23	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
43	A7MMD8	644	RNB_CROS8 Exoribonuclease 2 OS=Cronobacter sa...	353	0.000000000003	74.3	24	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
44	A8AG96	644	RNB_CITK8 Exoribonuclease 2 OS=Citrobacter ko...	354	0.000000000003	74.3	23	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
45	Q66AH3	644	RNB_YERPS Exoribonuclease 2 OS=Yersinia pseud...	345	0.000000000003	73.9	22	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
46	B2K4J2	644	RNB_YERPB Exoribonuclease 2 OS=Yersinia pseud...	345	0.000000000003	73.9	22	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
47	P47350	725	RNR_MYCGE Ribonuclease R OS=Mycoplasma genita...	502	0.000000000004	73.9	25	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0016070; P:RNA metabolic process; IEA:InterPro.
48	A6T7Z4	644	RNB_KLEP7 Exoribonuclease 2 OS=78578). GN=rnb...	354	0.000000000005	73.6	25	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
49	A4WAX5	644	RNB_ENT38 Exoribonuclease 2 OS=Enterobacter s...	353	0.000000000005	73.6	24	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
50	P30851	813	RNR_SHIFL Ribonuclease R OS=Shigella flexneri...	358	0.000000000005	73.6	25	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0016070; P:RNA metabolic process; IEA:InterPro.
51	A0KFR1	673	RNB_AERHH Exoribonuclease 2 OS=Aeromonas hydr...	354	0.000000000007	73.2	22	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
52	Q7N4F5	647	RNB_PHOLL Exoribonuclease 2 OS=Photorhabdus l...	362	0.000000000009	72.8	24	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
53	Q98QL0	725	RNR_MYCPU Ribonuclease R OS=Mycoplasma pulmon...	550	0.00000000001	72.8	22	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0016070; P:RNA metabolic process; IEA:InterPro.
54	B7LRZ1	644	RNB_ESCF3 Exoribonuclease 2 OS=Escherichia fe...	354	0.00000000001	72.4	22	40	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
55	D3V184	646	RNB_XENBS Exoribonuclease 2 OS=Xenorhabdus bo...	355	0.00000000001	72.4	25	40	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
56	Q8K9Q5	646	RNB_BUCAP Exoribonuclease 2 OS=Buchnera aphid...	349	0.00000000002	71.6	27	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
57	A5F0G1	678	RNB_VIBC3 Exoribonuclease 2 OS=Vibrio cholera...	405	0.00000000002	71.2	25	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
58	B5XS03	644	RNB_KLEP3 Exoribonuclease 2 OS=Klebsiella pne...	350	0.00000000003	70.9	23	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
59	Q9CP74	658	RNB_PASMU Exoribonuclease 2 OS=Pasteurella mu...	432	0.00000000004	70.5	21	39	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
60	B8F4C5	659	RNB_HAEPS Exoribonuclease 2 OS=Haemophilus pa...	435	0.00000000005	70.5	20	40	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IEA:InterPro.
61	Q9CH00	817	RNR1_LACLA Ribonuclease R 1 OS=lactis). GN=rn...	351	0.00000000006	70.1	25	45	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0016070; P:RNA metabolic process; IEA:InterPro.

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