Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR285C
Length:
515
Number of sequences:
5887
Description:
YMR285C NGL2 SGDID:S000004898, Chr XIII from 841691-840144, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p and Ngl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q03264    515   NGL2_YEAST RNA exonuclease NGL2 OS=Saccharomy...5150     1083     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004521; F:endoribonuclease activity; IMP:SGD.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IMP:SGD.
2Q03210    505   NGL3_YEAST Probable RNA exonuclease NGL3 OS=S...4754e-129     392     42     62
GO:0004535; F:poly(A)-specific ribonuclease activity; IDA:SGD.
GO:0043633; P:polyadenylation-dependent RNA catabolic process; IDA:SGD.
3Q9Y7M8    502   YNTB_SCHPO Probable RNA exonuclease C9B6.11c ...5081e-72     245     33     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004521; F:endoribonuclease activity; ISS:PomBase.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; ISS:PomBase.
4A8MS41    417   CCR4D_ARATH Carbon catabolite repressor prote...2709e-18     89     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q6CEJ6    705   CCR4_YARLI Glucose-repressible alcohol dehydr...2370.000000000000001     83.6     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q5XH73    550   CN6LB_XENLA CCR4-NOT transcription complex su...2940.00000000000006     77.8     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
7Q6IR85    550   CN6LA_XENLA CCR4-NOT transcription complex su...2920.00000000000007     77.4     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
8Q0U7W4    597   CCR4_PHANO Glucose-repressible alcohol dehydr...726.6     33.1     32     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q5A761    787   CCR4_CANAL Glucose-repressible alcohol dehydr...2860.0000000000003     75.9     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0009272; P:fungal-type cell wall biogenesis; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.::GO:0055091; P:phospholipid homeostasis; IMP:CGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q6AXU9    557   CNOT6_RAT CCR4-NOT transcription complex subu...2290.0000000000003     75.5     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q8K3P5    557   CNOT6_MOUSE CCR4-NOT transcription complex su...2290.0000000000003     75.5     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q5BJ41    552   CNOT6_XENLA CCR4-NOT transcription complex su...2290.0000000000003     75.5     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q8W0Z9    602   CCR4A_ARATH Carbon catabolite repressor prote...2410.0000000000006     74.7     24     43GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q6L8Q7    609   PDE12_HUMAN 2',5'-phosphodiesterase 12 OS=Hom...880.16     38.5     28     44
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
15Q9ULM6    557   CNOT6_HUMAN CCR4-NOT transcription complex su...2290.000000000002     73.2     26     47GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; TAS:Reactome.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16A2BHJ4    559   CNO6L_DANRE CCR4-NOT transcription complex su...2920.000000000002     73.2     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
17Q08DF7    609   PDE12_BOVIN 2',5'-phosphodiesterase 12 OS=Bos...880.73     36.2     27     44
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
18Q5RGT6    569   ANGE2_DANRE Protein angel homolog 2 OS=Danio ...2180.000000000002     72.8     25     45
19P0CP22    744   CCR4_CRYNJ Glucose-repressible alcohol dehydr...1740.000000000003     72.8     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
20P0CP23    744   CCR4_CRYNB Glucose-repressible alcohol dehydr...1740.000000000003     72.8     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21Q3TIU4    608   PDE12_MOUSE 2',5'-phosphodiesterase 12 OS=Mus...880.2     38.1     28     44GO:0005739; C:mitochondrion; IDA:MGI.
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
22A6H7I3    544   ANGE2_BOVIN Protein angel homolog 2 OS=Bos ta...2330.000000000005     71.6     26     45
23Q75BI3    736   CCR4_ASHGO Glucose-repressible alcohol dehydr...2300.000000000008     71.6     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24Q8VEG6    555   CNO6L_MOUSE CCR4-NOT transcription complex su...2440.00000000001     70.5     23     45GO:0005737; C:cytoplasm; IDA:MGI.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IMP:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0061157; P:mRNA destabilization; IMP:MGI.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IMP:MGI.::GO:0008284; P:positive regulation of cell proliferation; IMP:MGI.
25Q6AXQ5    608   PDE12_RAT 2',5'-phosphodiesterase 12 OS=Rattu...880.17     38.1     28     44
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
26Q96LI5    555   CNO6L_HUMAN CCR4-NOT transcription complex su...2450.00000000002     69.7     24     45
27Q9UNK9    670   ANGE1_HUMAN Protein angel homolog 1 OS=Homo s...2170.00000000002     69.7     28     47
28Q6BMM5    831   CCR4_DEBHA Glucose-repressible alcohol dehydr...2280.00000000003     69.7     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
29Q8VCU0    667   ANGE1_MOUSE Protein angel homolog 1 OS=Mus mu...2170.00000000003     69.7     28     47
30B2RYM0    667   ANGE1_RAT Protein angel homolog 1 OS=Rattus n...2170.00000000003     69.3     28     47
31Q5VTE6    544   ANGE2_HUMAN Protein angel homolog 2 OS=Homo s...2150.00000000004     68.9     27     45
records
Previous ‹‹ ›› Next Total records: 62 1 - 30
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::