Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR285C
Length:
515
Number of sequences:
5887
Description:
YMR285C NGL2 SGDID:S000004898, Chr XIII from 841691-840144, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p and Ngl3p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q5VTE6    544   ANGE2_HUMAN Protein angel homolog 2 OS=Homo s...2150.00000000004     68.9     27     45
32Q6FRT2    873   CCR4_CANGA Glucose-repressible alcohol dehydr...2260.0000000002     67.4     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
33Q6CJU4    790   CCR4_KLULA Glucose-repressible alcohol dehydr...2300.0000000002     67.4     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
34Q8K1C0    544   ANGE2_MOUSE Protein angel homolog 2 OS=Mus mu...2320.0000000002     66.6     25     43
35O74874    690   CCR4_SCHPO Glucose-repressible alcohol dehydr...2290.0000000002     66.6     24     45GO:0030015; C:CCR4-NOT core complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
36Q9M2F8    603   CCR4B_ARATH Carbon catabolite repressor prote...2360.0000000003     66.2     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37P31384    837   CCR4_YEAST Glucose-repressible alcohol dehydr...2360.0000000006     65.5     25     43GO:0030015; C:CCR4-NOT core complex; IPI:SGD.::GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0048478; P:replication fork protection; IGI:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0007089; P:traversing start control point of mitotic cell cycle; IMP:SGD.
38Q0WKY2    454   CCR4E_ARATH Carbon catabolite repressor prote...3990.000000001     63.9     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
39Q9LS39    448   CCR4C_ARATH Carbon catabolite repressor prote...3440.000000002     63.2     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40Q8SU52    493   CCR4_ENCCU Probable glucose-repressible alcoh...1720.000000003     62.8     29     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
41Q9C2R2    793   CCR4_NEUCR Glucose-repressible alcohol dehydr...2420.000000003     63.2     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q24239    354   ANGEL_DROME Protein angel OS=Drosophila melan...2210.00000001     60.1     26     43
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
43Q9UK39    431   NOCT_HUMAN Nocturnin OS=Homo sapiens (Human)....2430.00000002     60.1     26     40GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
44Q2UUI3    746   CCR4_ASPOR Glucose-repressible alcohol dehydr...2740.00000003     60.5     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45B7XK66    481   CCR4_ENTBH Probable glucose-repressible alcoh...1670.00000004     59.3     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
46P79942    388   NOCT_XENLA Nocturnin OS=Xenopus laevis (Afric...2690.0000001     57.8     27     41
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
47Q4P9T3    670   CCR4_USTMA Glucose-repressible alcohol dehydr...2930.0000001     58.2     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48A2Q9L0    656   CCR4_ASPNC Glucose-repressible alcohol dehydr...2200.0000002     57     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
49O35710    429   NOCT_MOUSE Nocturnin OS=Mus musculus (Mouse)....2250.0000007     55.1     26     40
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
50Q8VYU4    754   CCR4F_ARATH Carbon catabolite repressor prote...2780.0000008     55.5     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
51Q5B778    675   CCR4_EMENI Glucose-repressible alcohol dehydr...2740.0000009     55.1     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
52Q9ET55    253   NOCT_RAT Nocturnin OS=Rattus norvegicus (Rat)...2190.000002     52.8     25     40
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
53A1CW67    750   CCR4_NEOFI Glucose-repressible alcohol dehydr...2000.000004     53.1     21     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
54Q1EA11    687   CCR4_COCIM Glucose-repressible alcohol dehydr...2010.000005     53.1     21     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
55A1CIJ6    667   CCR4_ASPCL Glucose-repressible alcohol dehydr...2230.000005     52.8     20     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
56Q4WQG5    696   CCR4_ASPFU Glucose-repressible alcohol dehydr...2000.000005     52.8     21     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
57Q0CT27    677   CCR4_ASPTN Glucose-repressible alcohol dehydr...2370.000009     52     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
58C4V7I7    476   CCR4_NOSCE Probable glucose-repressible alcoh...2430.00003     50.1     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
59Q08213    363   NGL1_YEAST RNA exonuclease NGL1 OS=Saccharomy...800.045     39.7     31     54GO:0005739; C:mitochondrion; IDA:SGD.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
60Q2YAU8    212   HIS5_NITMU Imidazole glycerol phosphate synth...372.2     33.9     46     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016763; F:transferase activity, transferring pentosyl groups; IEA:InterPro.
GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.::GO:0000105; P:histidine biosynthetic process; IEA:UniProtKB-KW.
61Q86283    352   S9_DPIRV Uncharacterized protein S9 OS=Diadro...605     33.1     37     57GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
records
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