Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR260C
Length:
153
Number of sequences:
5887
Description:
YMR260C TIF11 SGDID:S000004873, Chr XIII from 789839-789378, Genome Release 64-1-1, reverse complement, Verified ORF, "Translation initiation factor eIF1A, essential protein that forms a complex with Sui1p (eIF1) and the 40S ribosomal subunit and scans for the start codon; C-terminus associates with Fun12p (eIF5B); N terminus interacts with eIF2 and eIF3"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38912    153   IF1A_YEAST Eukaryotic translation initiation ...1533e-107     309     100     100GO:0005840; C:ribosome; TAS:SGD.
GO:0003725; F:double-stranded RNA binding; IDA:SGD.::GO:0003743; F:translation initiation factor activity; TAS:SGD.
2P55877    138   IF1A_SCHPO Eukaryotic translation initiation ...1339e-63     195     71     83GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005840; C:ribosome; ISS:PomBase.
GO:0033592; F:RNA strand annealing activity; IDA:PomBase.::GO:0003743; F:translation initiation factor activity; ISS:PomBase.
GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
3Q6GVM3    144   IF1AY_PANTR Eukaryotic translation initiation...1313e-56     179     66     80
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
4Q5RA42    144   IF1AX_PONAB Eukaryotic translation initiation...1314e-56     179     66     80
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
5Q8BMJ3    144   IF1AX_MOUSE Eukaryotic translation initiation...1314e-56     179     66     80
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
6P47813    144   IF1AX_HUMAN Eukaryotic translation initiation...1314e-56     179     66     80GO:0005829; C:cytosol; TAS:Reactome.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
7O14602    144   IF1AY_HUMAN Eukaryotic translation initiation...1315e-56     178     66     80GO:0005737; C:cytoplasm; IDA:HPA.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
8Q6VV72    144   IF1A_RAT Eukaryotic translation initiation fa...1311e-55     177     64     80
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
9Q60872    144   IF1A_MOUSE Eukaryotic translation initiation ...1311e-55     177     64     80
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
10P47814    144   IF1A_RABIT Eukaryotic translation initiation ...1314e-54     173     64     79
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
11Q54YJ6    141   IF1A_DICDI Eukaryotic translation initiation ...1409e-53     170     61     76
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
12P47815    144   IF1A_WHEAT Eukaryotic translation initiation ...1491e-47     157     56     70
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
13P56331    145   IF1A_ONOVI Eukaryotic translation initiation ...1172e-46     154     62     77
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
14C3N8M9    108   IF1A_SULIY Translation initiation factor 1A O...875e-21     87.4     44     67
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
15C3NMA0    108   IF1A_SULIN Translation initiation factor 1A O...875e-21     87.4     44     67
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
16C3MU29    108   IF1A_SULIM Translation initiation factor 1A O...875e-21     87.4     44     67
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
17C3MK60    108   IF1A_SULIL Translation initiation factor 1A O...875e-21     87.4     44     67
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
18C4KK84    108   IF1A_SULIK Translation initiation factor 1A O...875e-21     87.4     44     67
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
19C3N0P1    108   IF1A_SULIA Translation initiation factor 1A O...875e-21     87.4     44     67
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
20Q97W62    108   IF1A_SULSO Translation initiation factor 1A O...877e-21     87     44     67
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
21Q4JA54    108   IF1A_SULAC Translation initiation factor 1A O...886e-19     82     39     65
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
22Q8TXZ3    111   IF1A_METKA Translation initiation factor 1A O...995e-18     79.7     38     61
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
23Q974Z9    108   IF1A_SULTO Translation initiation factor 1A O...807e-17     76.3     39     65
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
24B0R7D8    95   IF1A_HALS3 Translation initiation factor 1A O...931e-16     75.5     37     63
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
25Q9HN64    95   IF1A1_HALSA Translation initiation factor 1A ...931e-16     75.5     37     63
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
26A4YEH8    108   IF1A_METS5 Translation initiation factor 1A O...832e-16     74.7     39     61
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
27Q3IT14    97   IF1A_NATPD Translation initiation factor 1A O...963e-16     74.3     38     63
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
28O29481    97   IF1A_ARCFU Translation initiation factor 1A O...810.000000000000001     72.8     37     65
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
29A2STQ8    105   IF1A_METLZ Translation initiation factor 1A O...810.000000000000001     73.2     37     63
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
30Q5UZM2    95   IF1A_HALMA Translation initiation factor 1A O...950.000000000000008     70.5     36     61
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
31Q18EX1    96   IF1A1_HALWD Translation initiation factor 1A ...750.00000000000001     70.1     39     65
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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