Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR260C
Length:
153
Number of sequences:
5887
Description:
YMR260C TIF11 SGDID:S000004873, Chr XIII from 789839-789378, Genome Release 64-1-1, reverse complement, Verified ORF, "Translation initiation factor eIF1A, essential protein that forms a complex with Sui1p (eIF1) and the 40S ribosomal subunit and scans for the start codon; C-terminus associates with Fun12p (eIF5B); N terminus interacts with eIF2 and eIF3"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q5HZM1    169   EIF1A_XENLA Probable RNA-binding protein EIF1...1030.005     39.3     27     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
62Q58CY2    166   EIF1A_BOVIN Probable RNA-binding protein EIF1...980.011     38.1     22     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
63Q5RD29    166   EIF1A_PONAB Probable RNA-binding protein EIF1...880.029     37     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
64Q4R354    165   EIF1A_MACFA Probable RNA-binding protein EIF1...880.033     36.6     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
65Q8N9N8    165   EIF1A_HUMAN Probable RNA-binding protein EIF1...880.033     36.6     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
66Q3THJ3    170   EIF1A_MOUSE Probable RNA-binding protein EIF1...1240.057     36.2     22     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
67Q5RKI6    167   EIF1A_RAT Probable RNA-binding protein EIF1AD...880.069     35.8     20     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
68Q7UEY5    73   IF1_RHOBA Translation initiation factor IF-1 ...680.099     33.9     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
69A0LRP3    73   IF1_ACIC1 Translation initiation factor IF-1 ...600.1     33.9     28     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
70Q7SY07    172   EIF1A_DANRE Probable RNA-binding protein EIF1...1030.45     33.5     25     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
71Q6K1L7    188   EIF1A_CHICK Probable RNA-binding protein EIF1...1050.47     33.5     25     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
72Q3ZJ80    109   IF1C_PSEAK Translation initiation factor IF-1...580.74     32     29     55GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
73A1SNJ3    73   IF1_NOCSJ Translation initiation factor IF-1 ...750.8     31.2     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
74A9WH88    73   IF1_CHLAA Translation initiation factor IF-1 ...591     31.2     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
75A6LLN6    74   IF1_THEM4 Translation initiation factor IF-1 ...691.2     30.8     30     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
76A7HM29    90   IF1_FERNB Translation initiation factor IF-1 ...621.3     31.2     29     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
77Q6G252    72   IF1_BARHE Translation initiation factor IF-1 ...691.7     30.4     26     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
78Q0AQL4    72   IF1_MARMM Translation initiation factor IF-1 ...692     30     25     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
79A5D5E3    72   IF1_PELTS Translation initiation factor IF-1 ...552.9     29.6     27     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
80A6W5W1    73   IF1_KINRD Translation initiation factor IF-1 ...753.7     29.3     25     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
81Q6FYU2    72   IF1_BARQU Translation initiation factor IF-1 ...695     28.9     26     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
82Q8IQ13    159   EIF1A_DROME Probable RNA-binding protein EIF1...495.5     30     31     49
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
83Q29MZ0    163   EIF1A_DROPS Probable RNA-binding protein EIF1...516.9     30     27     51
GO:0003743; F:translation initiation factor activity; IEA:InterPro.
records
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