Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR242C
Length:
172
Number of sequences:
5887
Description:
YMR242C RPL20A SGDID:S000004855, Chr XIII from 753742-753225,754220-754220, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similarity to rat L18a ribosomal protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P0CX24    172   RL20B_YEAST 60S ribosomal protein L20-B OS=Sa...1725e-125     356     100     100GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
2P0CX23    172   RL20A_YEAST 60S ribosomal protein L20-A OS=Sa...1725e-125     356     100     100GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
3P05732    176   RL20_SCHPO 60S ribosomal protein L20 OS=Schiz...1741e-80     243     67     78GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.
4Q8WQI7    177   RL18A_SPOFR 60S ribosomal protein L18a OS=Spo...1731e-65     205     56     75GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
5Q02543    176   RL18A_HUMAN 60S ribosomal protein L18a OS=Hom...1717e-63     198     56     71GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.
GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
6Q3T003    176   RL18A_BOVIN 60S ribosomal protein L18a OS=Bos...1717e-63     198     56     71
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
7P62718    176   RL18A_RAT 60S ribosomal protein L18a OS=Rattu...1718e-63     197     56     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
8P62717    176   RL18A_MOUSE 60S ribosomal protein L18a OS=Mus...1718e-63     197     56     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
9O57561    176   RL18A_SALSA 60S ribosomal protein L18a OS=Sal...1715e-62     196     56     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
10P41093    177   RL18A_DROME 60S ribosomal protein L18a OS=Dro...1715e-61     193     54     73GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0051298; P:centrosome duplication; IMP:FlyBase.::GO:0000022; P:mitotic spindle elongation; IMP:FlyBase.::GO:0006412; P:translation; IEA:InterPro.
11Q7ZWJ4    176   RL18A_DANRE 60S ribosomal protein L18a OS=Dan...1712e-60     192     54     70GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
12Q54MK8    171   RL18A_DICDI 60S ribosomal protein L18a OS=Dic...1671e-59     189     53     72GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
13Q90YU9    176   RL18A_ICTPU 60S ribosomal protein L18a OS=Ict...1711e-59     189     53     70GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
14O44480    180   RL18A_CAEEL 60S ribosomal protein L18a OS=Cae...1716e-56     180     51     70GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006412; P:translation; IEA:InterPro.
15Q943F3    178   RL18A_ORYSJ 60S ribosomal protein L18a OS=Ory...1733e-55     178     50     70
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
16P51418    178   R18A2_ARATH 60S ribosomal protein L18a-2 OS=A...1732e-54     176     49     70GO:0022625; C:cytosolic large ribosomal subunit; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
17Q9ATF5    178   RL18A_CASSA 60S ribosomal protein L18a OS=Cas...1492e-53     174     54     76GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
18Q9LUD4    178   R18A3_ARATH 60S ribosomal protein L18a-3 OS=A...1739e-53     172     47     68GO:0022625; C:cytosolic large ribosomal subunit; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
19P0DJ18    189   RL18A_TETTH 60S ribosomal protein L18a OS=Tet...1728e-38     134     40     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
20A9A8N2    76   RLX_METM6 50S ribosomal protein LX OS=Methano...530.92     31.6     34     60GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
21P00803    324   LEP_ECOLI Signal peptidase I OS=Escherichia c...671.6     32.7     31     51GO:0016021; C:integral to membrane; IDA:EcoliWiki.::GO:0005886; C:plasma membrane; IDA:EcoliWiki.
GO:0008236; F:serine-type peptidase activity; IEA:InterPro.::GO:0015643; F:toxin binding; IMP:EcoliWiki.
GO:0016485; P:protein processing; IMP:EcoliWiki.::GO:0006508; P:proteolysis; IDA:EcoliWiki.
22P0A1W2    324   LEP_SALTY Signal peptidase I OS=Salmonella ty...671.6     32.7     34     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008236; F:serine-type peptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
23P0A1W3    324   LEP_SALTI Signal peptidase I OS=Salmonella ty...671.6     32.7     34     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008236; F:serine-type peptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
24A6UR53    76   RLX_METVS 50S ribosomal protein LX OS=Methano...281.9     30.4     36     71GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
25O75127    700   PTCD1_HUMAN Pentatricopeptide repeat-containi...443     32     39     50
26P58289    88   RLX_AERPE 50S ribosomal protein LX OS=100138 ...513.6     30     31     55GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
27A6VI47    76   RLX_METM7 50S ribosomal protein LX OS=Methano...534.9     29.3     34     58GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
28Q5L782    338   HEM1_CHLAB Glutamyl-tRNA reductase OS=Chlamyd...855     31.2     32     44
GO:0008883; F:glutamyl-tRNA reductase activity; IEA:EC.::GO:0050661; F:NADP binding; IEA:InterPro.
GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
29A4G0D0    76   RLX_METM5 50S ribosomal protein LX OS=Methano...435.2     29.3     28     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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