Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR236W
Length:
157
Number of sequences:
5887
Description:
YMR236W TAF9 SGDID:S000004849, Chr XIII from 742971-743444, Genome Release 64-1-1, Verified ORF, "Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q05027    157   TAF9_YEAST Transcription initiation factor TF...1576e-114     327     100     100GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.::GO:0005669; C:transcription factor TFIID complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032947; F:protein complex scaffold; IMP:SGD.
GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.
2Q09869    163   TAF9_SCHPO Transcription initiation factor TF...1201e-38     134     49     71GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; ISS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0016573; P:histone acetylation; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:PomBase.
3Q16594    264   TAF9_HUMAN Transcription initiation factor TF...1344e-22     93.6     33     56GO:0071339; C:MLL1 complex; IDA:UniProtKB.::GO:0000125; C:PCAF complex; IDA:UniProtKB.::GO:0070761; C:pre-snoRNP complex; IDA:BHF-UCL.::GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0005669; C:transcription factor TFIID complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0033613; F:activating transcription factor binding; IPI:BHF-UCL.::GO:0070742; F:C2H2 zinc finger domain binding; IPI:BHF-UCL.::GO:0002039; F:p53 binding; IPI:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IMP:BHF-UCL.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; IMP:UniProtKB.::GO:0060760; P:positive regulation of response to cytokine stimulus; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0006974; P:response to DNA damage stimulus; IC:BHF-UCL.::GO:0070555; P:response to interleukin-1; IMP:BHF-UCL.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
4Q17QQ4    264   TAF9_BOVIN Transcription initiation factor TF...1349e-22     92.8     33     56GO:0071339; C:MLL1 complex; ISS:UniProtKB.
GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
5Q8VI33    264   TAF9_MOUSE Transcription initiation factor TF...1341e-21     92.4     33     56GO:0071339; C:MLL1 complex; ISS:UniProtKB.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
6Q5R7P7    251   TAF9B_PONAB Transcription initiation factor T...1342e-21     92     34     55
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
7Q9HBM6    251   TAF9B_HUMAN Transcription initiation factor T...1342e-21     92     34     55GO:0005669; C:transcription factor TFIID complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IC:BHF-UCL.
GO:0043066; P:negative regulation of apoptotic process; IMP:BHF-UCL.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; IMP:UniProtKB.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
8Q5BKE0    264   TAF9_RAT Transcription initiation factor TFII...1342e-21     91.7     33     56GO:0071339; C:MLL1 complex; ISS:UniProtKB.
GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
9Q6NZA9    249   TAF9B_MOUSE Transcription initiation factor T...1262e-20     89     33     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
10Q62880    258   TAF9B_RAT Transcription initiation factor TFI...1263e-20     88.2     33     55
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0012501; P:programmed cell death; IEP:RGD.::GO:0014070; P:response to organic cyclic compound; IEP:RGD.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
11Q27272    278   TAF9_DROME Transcription initiation factor TF...1340.000000000000001     75.1     30     51GO:0000124; C:SAGA complex; IDA:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:FlyBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
12Q8SSI9    137   TAF9_ENCCU Transcription initiation factor TF...1220.00000000000004     69.7     30     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
records
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