Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR235C
Length:
407
Number of sequences:
5887
Description:
YMR235C RNA1 SGDID:S000004848, Chr XIII from 742735-741512, Genome Release 64-1-1, reverse complement, Verified ORF, "GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q9WTR8    1696   PHLP1_RAT PH domain leucine-rich repeat prote...1224     33.5     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:RGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004722; F:protein serine/threonine phosphatase activity; IDA:RGD.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0007623; P:circadian rhythm; IEP:RGD.::GO:0006470; P:protein dephosphorylation; IDA:RGD.
32Q8HZP9    461   RINI_PANTR Ribonuclease inhibitor OS=Pan trog...1204.3     33.1     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
33Q8IZ02    419   LRC34_HUMAN Leucine-rich repeat-containing pr...525.3     32.7     37     50
34Q58T51    144   M1111_BOMMX Maximins 11/H11 OS=Bombina maxima...555.7     31.6     35     49GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0019835; P:cytolysis; IEA:UniProtKB-KW.::GO:0042742; P:defense response to bacterium; IEA:UniProtKB-KW.::GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.::GO:0044179; P:hemolysis in other organism; IEA:UniProtKB-KW.
35Q6F5E8    1435   LR16C_HUMAN Leucine-rich repeat-containing pr...675.8     33.1     33     51
36Q58T41    144   M11H1_BOMMX Maximins 11/H1 OS=Bombina maxima ...555.9     31.6     35     49GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0019835; P:cytolysis; IEA:UniProtKB-KW.::GO:0042742; P:defense response to bacterium; IEA:UniProtKB-KW.::GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.::GO:0044179; P:hemolysis in other organism; IEA:UniProtKB-KW.
37Q4V8D9    415   LRC34_RAT Leucine-rich repeat-containing prot...526     32.7     37     50
38Q9LVN2    785   Y5815_ARATH Probably inactive leucine-rich re...2116.2     32.7     24     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005773; C:vacuole; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004672; F:protein kinase activity; IEA:InterPro.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
39A7Z026    699   PPR37_BOVIN Protein phosphatase 1 regulatory ...2636.7     32.7     22     41
GO:0019902; F:phosphatase binding; ISS:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.
GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
40Q58T56    144   M8H7_BOMMX Maximins 8/H7 OS=Bombina maxima (G...476.8     31.6     38     53GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0019835; P:cytolysis; IEA:UniProtKB-KW.::GO:0042742; P:defense response to bacterium; IEA:UniProtKB-KW.::GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.::GO:0044179; P:hemolysis in other organism; IEA:UniProtKB-KW.
41Q9NR96    1032   TLR9_HUMAN Toll-like receptor 9 OS=Homo sapie...1527.6     32.7     26     44GO:0016324; C:apical plasma membrane; IDA:BHF-UCL.::GO:0016323; C:basolateral plasma membrane; IDA:BHF-UCL.::GO:0032009; C:early phagosome; ISS:UniProtKB.::GO:0036020; C:endolysosome membrane; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0005576; C:extracellular region; NAS:UniProtKB.::GO:0000139; C:Golgi membrane; TAS:Reactome.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005149; F:interleukin-1 receptor binding; IPI:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0035197; F:siRNA binding; IMP:UniProtKB.
GO:0042742; P:defense response to bacterium; NAS:UniProtKB.::GO:0007252; P:I-kappaB phosphorylation; IDA:BHF-UCL.::GO:0006954; P:inflammatory response; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; TAS:BHF-UCL.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0030277; P:maintenance of gastrointestinal epithelium; ISS:BHF-UCL.::GO:0032715; P:negative regulation of interleukin-6 production; ISS:BHF-UCL.::GO:0032717; P:negative regulation of interleukin-8 production; IDA:BHF-UCL.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IDA:BHF-UCL.::GO:0034122; P:negative regulation of toll-like receptor signaling pathway; IDA:BHF-UCL.::GO:0032722; P:positive regulation of chemokine production; IDA:BHF-UCL.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; IDA:BHF-UCL.::GO:0050729; P:positive regulation of inflammatory response; IC:BHF-UCL.::GO:0045356; P:positive regulation of interferon-alpha biosynthetic process; IDA:UniProtKB.::GO:0045359; P:positive regulation of interferon-beta biosynthetic process; IDA:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:BHF-UCL.::GO:0045078; P:positive regulation of interferon-gamma biosynthetic process; IDA:UniProtKB.::GO:0032733; P:positive regulation of interleukin-10 production; ISS:BHF-UCL.::GO:0032735; P:positive regulation of interleukin-12 production; ISS:BHF-UCL.::GO:0032741; P:positive regulation of interleukin-18 production; ISS:BHF-UCL.::GO:0032755; P:positive regulation of interleukin-6 production; IDA:BHF-UCL.::GO:0032757; P:positive regulation of interleukin-8 production; IDA:BHF-UCL.::GO:0046330; P:positive regulation of JNK cascade; IC:BHF-UCL.::GO:0043507; P:positive regulation of JUN kinase activity; IDA:BHF-UCL.::GO:0042346; P:positive regulation of NF-kappaB import into nucleus; IDA:BHF-UCL.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IDA:BHF-UCL.::GO:0051770; P:positive regulation of nitric-oxide synthase biosynthetic process; ISS:BHF-UCL.::GO:0034123; P:positive regulation of toll-like receptor signaling pathway; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:BHF-UCL.::GO:0032760; P:positive regulation of tumor necrosis factor production; ISS:BHF-UCL.::GO:0002237; P:response to molecule of bacterial origin; TAS:BHF-UCL.
42Q02805    837   ROD1_YEAST Protein ROD1 OS=Saccharomyces cere...958.4     32.3     23     46GO:0005886; C:plasma membrane; IDA:SGD.
GO:0031625; F:ubiquitin protein ligase binding; IPI:SGD.
GO:0042493; P:response to drug; IMP:SGD.
43Q47427    203   TFAB_ECOLX Tail fiber assembly protein homolo...809.8     31.6     30     46
44Q95VZ3    1050   CARML_DICDI Protein CARMIL OS=Dictyostelium d...1029.8     32.3     25     50GO:0031143; C:pseudopodium; IEA:UniProtKB-SubCell.
GO:0017024; F:myosin I binding; TAS:dictyBase.
GO:0045010; P:actin nucleation; TAS:dictyBase.
45A0JPI9    479   CN16B_RAT Uncharacterized protein C14orf166B ...22510     32     25     40
records
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