Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR235C
Length:
407
Number of sequences:
5887
Description:
YMR235C RNA1 SGDID:S000004848, Chr XIII from 742735-741512, Genome Release 64-1-1, reverse complement, Verified ORF, "GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P11745    407   RNA1_YEAST Ran GTPase-activating protein 1 OS...4070     817     100     100GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005098; F:Ran GTPase activator activity; IDA:SGD.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0006606; P:protein import into nucleus; IDA:SGD.::GO:0000054; P:ribosomal subunit export from nucleus; IMP:SGD.::GO:0006404; P:RNA import into nucleus; IMP:SGD.::GO:0006407; P:rRNA export from nucleus; IMP:SGD.::GO:0016072; P:rRNA metabolic process; IMP:SGD.::GO:0006399; P:tRNA metabolic process; IMP:SGD.
2P41391    386   RNA1_SCHPO Ran GTPase-activating protein 1 OS...3342e-72     238     44     61GO:0005829; C:cytosol; IDA:PomBase.::GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0005098; F:Ran GTPase activator activity; TAS:PomBase.
GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0051383; P:kinetochore organization; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006913; P:nucleocytoplasmic transport; IGI:PomBase.
3Q9VIW3    596   RAGP1_DROME Ran GTPase-activating protein OS=...3842e-33     135     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005098; F:Ran GTPase activator activity; IDA:FlyBase.
GO:0045132; P:meiotic chromosome segregation; TAS:FlyBase.::GO:0006913; P:nucleocytoplasmic transport; NAS:FlyBase.
4O13066    580   RAGP1_XENLA Ran GTPase-activating protein 1 O...3281e-32     132     33     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005098; F:Ran GTPase activator activity; IEA:InterPro.
GO:0007165; P:signal transduction; IEA:InterPro.
5P46060    587   RAGP1_HUMAN Ran GTPase-activating protein 1 O...3262e-32     132     31     52GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005625; C:soluble fraction; TAS:ProtInc.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005098; F:Ran GTPase activator activity; TAS:ProtInc.
GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0046826; P:negative regulation of protein export from nucleus; IDA:BHF-UCL.::GO:0007165; P:signal transduction; TAS:ProtInc.
6P46061    589   RAGP1_MOUSE Ran GTPase-activating protein 1 O...3293e-31     129     32     51GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0005098; F:Ran GTPase activator activity; IEA:InterPro.
GO:0007165; P:signal transduction; IEA:InterPro.
7P34342    960   RGP2_CAEEL Ran GTPase-activating protein 2 OS...2971e-24     110     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0000003; P:reproduction; IMP:WormBase.
8Q9LE82    535   RAGP1_ARATH RAN GTPase-activating protein 1 O...4040.00000005     58.5     24     40GO:0032153; C:cell division site; IDA:TAIR.::GO:0009504; C:cell plate; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0009524; C:phragmoplast; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000910; P:cytokinesis; IMP:TAIR.::GO:0000072; P:M phase specific microtubule process; TAS:TAIR.::GO:0006606; P:protein import into nucleus; TAS:TAIR.
9C0LGJ1    1106   Y1743_ARATH Probable LRR receptor-like serine...3740.0001     48.1     25     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031966; C:mitochondrial membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
10Q9M651    545   RAGP2_ARATH RAN GTPase-activating protein 2 O...2800.0002     47     22     40GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005783; C:endoplasmic reticulum; IDA:TAIR.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0009524; C:phragmoplast; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0006913; P:nucleocytoplasmic transport; TAS:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.
11Q7RTR2    1065   NLRC3_HUMAN Protein NLRC3 OS=Homo sapiens (Hu...2590.004     43.1     25     41GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; IDA:UniProtKB.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IDA:UniProtKB.::GO:0042110; P:T cell activation; IEP:UniProtKB.
12C3VPR6    1915   NLRC5_MOUSE Protein NLRC5 OS=Mus musculus (Mo...3090.009     42     25     39GO:0005829; C:cytosol; IDA:BHF-UCL.::GO:0005634; C:nucleus; IDA:BHF-UCL.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0051607; P:defense response to virus; ISS:UniProtKB.::GO:0045087; P:innate immune response; IMP:UniProtKB.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IDA:UniProtKB.::GO:0060339; P:negative regulation of type I interferon-mediated signaling pathway; IDA:UniProtKB.::GO:0060335; P:positive regulation of interferon-gamma-mediated signaling pathway; ISS:UniProtKB.::GO:0060340; P:positive regulation of type I interferon-mediated signaling pathway; ISS:UniProtKB.
13Q5ZI11    670   LRC45_CHICK Leucine-rich repeat-containing pr...1460.096     38.5     24     41
14Q6B966    993   NAL14_MOUSE NACHT, LRR and PYD domains-contai...1980.32     37     26     36
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
15Q1L994    919   PPR37_DANRE Protein phosphatase 1 regulatory ...2610.38     37     21     39
GO:0019902; F:phosphatase binding; ISS:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.
GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
16P10775    456   RINI_PIG Ribonuclease inhibitor OS=Sus scrofa...2200.53     36.2     24     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
17Q8BKR5    712   PPR37_MOUSE Protein phosphatase 1 regulatory ...2630.6     36.2     23     42
GO:0019902; F:phosphatase binding; ISS:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.
GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
18O60346    1717   PHLP1_HUMAN PH domain leucine-rich repeat-con...3670.88     35.8     23     37GO:0005829; C:cytosol; TAS:Reactome.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004722; F:protein serine/threonine phosphatase activity; TAS:Reactome.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.
19B2RYF1    710   PPR37_RAT Protein phosphatase 1 regulatory su...2630.9     35.4     23     42
GO:0019902; F:phosphatase binding; ISS:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.
GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
20Q8CHE4    1687   PHLP1_MOUSE PH domain leucine-rich repeat-con...1220.98     35.4     28     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
21Q9NR97    1041   TLR8_HUMAN Toll-like receptor 8 OS=Homo sapie...1500.98     35.4     29     42GO:0036020; C:endolysosome membrane; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0000139; C:Golgi membrane; TAS:Reactome.::GO:0016021; C:integral to membrane; IC:UniProtKB.
GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0003725; F:double-stranded RNA binding; IDA:UniProtKB.::GO:0004872; F:receptor activity; NAS:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB.
GO:0071260; P:cellular response to mechanical stimulus; IEP:UniProtKB.::GO:0051607; P:defense response to virus; IMP:UniProtKB.::GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; IDA:UniProtKB.::GO:0016064; P:immunoglobulin mediated immune response; TAS:UniProtKB.::GO:0006954; P:inflammatory response; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; NAS:UniProtKB.::GO:0045089; P:positive regulation of innate immune response; IDA:UniProtKB.::GO:0045356; P:positive regulation of interferon-alpha biosynthetic process; IDA:UniProtKB.::GO:0045359; P:positive regulation of interferon-beta biosynthetic process; IDA:UniProtKB.::GO:0045078; P:positive regulation of interferon-gamma biosynthetic process; IDA:UniProtKB.::GO:0045416; P:positive regulation of interleukin-8 biosynthetic process; IMP:UniProtKB.
22Q9ZWC8    1166   BRL1_ARATH Serine/threonine-protein kinase BR...1001.2     35.4     27     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005496; F:steroid binding; IEA:UniProtKB-KW.
23Q9P7C5    270   CWF16_SCHPO Pre-mRNA-splicing factor cwf16 OS...1011.4     34.3     36     52GO:0005816; C:spindle pole body; IDA:PomBase.::GO:0005681; C:spliceosomal complex; IC:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase.
24P79621    1155   C2TA_MOUSE MHC class II transactivator OS=Mus...811.5     35     32     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; ISS:UniProtKB.
GO:0034341; P:response to interferon-gamma; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
25Q3V3V9    1296   LR16C_MOUSE Leucine-rich repeat-containing pr...369.3     32.3     42     64
26O75864    691   PPR37_HUMAN Protein phosphatase 1 regulatory ...2632.1     34.3     23     42
GO:0019902; F:phosphatase binding; IDA:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.
GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB.
27B3QWD9    397   PGK_CHLT3 Phosphoglycerate kinase OS=Chlorohe...1782.1     34.3     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004618; F:phosphoglycerate kinase activity; IEA:EC.
GO:0006096; P:glycolysis; IEA:UniProtKB-KW.
28Q5VZK9    1371   LR16A_HUMAN Leucine-rich repeat-containing pr...722.3     34.3     32     56GO:0005829; C:cytosol; TAS:Reactome.::GO:0030027; C:lamellipodium; IDA:BHF-UCL.::GO:0005634; C:nucleus; IDA:HPA.
GO:0007015; P:actin filament organization; NAS:BHF-UCL.::GO:0007596; P:blood coagulation; TAS:Reactome.::GO:0016477; P:cell migration; IMP:BHF-UCL.::GO:0030032; P:lamellipodium assembly; IMP:BHF-UCL.::GO:0031529; P:ruffle organization; IMP:BHF-UCL.::GO:0046415; P:urate metabolic process; IMP:BHF-UCL.
29Q5BEN5    1261   STU1_EMENI Protein stu1 OS=194 / M139) (Asper...753.1     33.9     36     60GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
30C6FG12    1726   NLRC5_ICTPU Protein NLRC5 OS=Ictalurus puncta...1535.9     33.1     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
31Q9WTR8    1696   PHLP1_RAT PH domain leucine-rich repeat prote...1224     33.5     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:RGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004722; F:protein serine/threonine phosphatase activity; IDA:RGD.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0007623; P:circadian rhythm; IEP:RGD.::GO:0006470; P:protein dephosphorylation; IDA:RGD.
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