Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR234W
Length:
348
Number of sequences:
5887
Description:
YMR234W RNH1 SGDID:S000004847, Chr XIII from 740266-741312, Genome Release 64-1-1, Verified ORF, "Ribonuclease H1; able to bind double-stranded RNAs and RNA-DNA hybrids; associates with RNAse polymerase I; the homolog of mammalian RNAse HII (the S. cerevisiae homolog of mammalian RNAse HI is RNH201)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301B8HPS9    157   RNH_CYAP4 Ribonuclease H OS=Cyanothece sp. (s...1670.028     38.5     29     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
302Q2GHJ9    146   RNH_EHRCR Ribonuclease H OS=Ehrlichia chaffee...1640.029     38.1     29     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
303Q7VQB6    167   RNH_BLOFL Ribonuclease H OS=Blochmannia flori...1640.032     38.5     28     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
304Q0HI86    158   RNH_SHESM Ribonuclease H OS=Shewanella sp. (s...1620.036     38.1     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
305Q0HUI2    158   RNH_SHESR Ribonuclease H OS=Shewanella sp. (s...1620.038     38.1     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
306P19028    1124   POL_FIVSD Pol polyprotein OS=Feline immunodef...1520.039     39.7     29     43
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004170; F:dUTP diphosphatase activity; IEA:EC.::GO:0004533; F:exoribonuclease H activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0046080; P:dUTP metabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
307Q5LNJ2    155   RNH_SILPO Ribonuclease H OS=Silicibacter pome...1590.044     37.7     26     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
308C0R2X2    145   RNH_WOLWR Ribonuclease H OS=Wolbachia sp. sub...1690.046     37.7     29     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
309Q2LWY9    173   RNH_SYNAS Ribonuclease H OS=Syntrophus acidit...1710.046     38.1     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
310Q3YR62    146   RNH_EHRCJ Ribonuclease H OS=Ehrlichia canis (...1640.053     37.4     28     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
311Q5ZVQ7    143   RNH_LEGPH Ribonuclease H OS=ATCC 33152 / DSM ...1610.057     37.4     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
312A5IBM5    143   RNH_LEGPC Ribonuclease H OS=Legionella pneumo...1610.057     37.4     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
313Q5X5I2    143   RNH_LEGPA Ribonuclease H OS=Legionella pneumo...1610.057     37.4     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
314A2C030    161   RNH_PROM1 Ribonuclease H OS=Prochlorococcus m...1550.06     37.4     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
315Q73I74    145   RNH_WOLPM Ribonuclease H OS=Wolbachia pipient...1690.068     37     29     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
316B1KHK0    161   RNH_SHEWM Ribonuclease H OS=Shewanella woodyi...1640.085     37     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
317P03558    520   IBMP_CAMVC Transactivator/viroplasmin protein...430.092     38.1     37     53GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
318P31822    1124   POL_FIVT2 Pol polyprotein OS=Feline immunodef...1520.093     38.5     28     43
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004170; F:dUTP diphosphatase activity; IEA:EC.::GO:0004533; F:exoribonuclease H activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0046080; P:dUTP metabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
319Q5WWW5    143   RNH_LEGPL Ribonuclease H OS=Legionella pneumo...1610.097     36.6     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
320A8FUS8    156   RNH_SHESH Ribonuclease H OS=Shewanella sedimi...1720.11     36.6     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
321Q08885    161   RNH_BUCAP Ribonuclease H OS=Buchnera aphidico...1640.11     37     29     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
322P16666    522   IBMP_CAMVB Transactivator/viroplasmin protein...430.14     37.7     35     53GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
323B4S5K2    146   RNH_PROA2 Ribonuclease H OS=Prosthecochloris ...1660.14     36.2     25     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
324Q8D3D3    157   RNH_WIGBR Ribonuclease H OS=Wigglesworthia gl...1670.15     36.2     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
325A5CX29    148   RNH_VESOH Ribonuclease H OS=Vesicomyosocius o...1560.17     36.2     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
326Q5FUH9    150   RNH_GLUOX Ribonuclease H OS=Gluconobacter oxy...870.24     35.4     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
327Q7UF86    158   RNH_RHOBA Ribonuclease H OS=Rhodopirellula ba...1590.25     35.8     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
328Q02836    1472   POL_SIVG1 Gag-Pol polyprotein OS=grivet). GN=...1540.29     37     26     38GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004533; F:exoribonuclease H activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
329P03559    520   IBMP_CAMVS Transactivator/viroplasmin protein...430.31     36.6     35     53GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
330Q05651    520   IBMP_CAMVW Transactivator/viroplasmin protein...430.32     36.6     35     53GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
331Q115G0    157   RNH_TRIEI Ribonuclease H OS=Trichodesmium ery...1690.33     35.4     27     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
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