Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR234W
Length:
348
Number of sequences:
5887
Description:
YMR234W RNH1 SGDID:S000004847, Chr XIII from 740266-741312, Genome Release 64-1-1, Verified ORF, "Ribonuclease H1; able to bind double-stranded RNAs and RNA-DNA hybrids; associates with RNAse polymerase I; the homolog of mammalian RNAse HII (the S. cerevisiae homolog of mammalian RNAse HI is RNH201)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q04740    348   RNH1_YEAST Ribonuclease H OS=Saccharomyces ce...3480     724     100     100GO:0005634; C:nucleus; IC:SGD.
GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IDA:SGD.
GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0006401; P:RNA catabolic process; IDA:SGD.
2Q9UST8    264   RNH1_SCHPO Ribonuclease H OS=Schizosaccharomy...430.0000000004     63.2     63     79GO:0005730; C:nucleolus; IDA:PomBase.
GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; ISS:PomBase.
GO:0006401; P:RNA catabolic process; ISS:PomBase.
3Q07762    494   RNH1_CRIFA Ribonuclease H OS=Crithidia fascic...3980.000000000000007     79     24     37
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
4Q1CTK9    143   RNH_HELPH Ribonuclease H OS=Helicobacter pylo...1660.00000000003     64.7     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
5Q9ZLH3    143   RNH_HELPJ Ribonuclease HI OS=Helicobacter pyl...1660.00000000003     64.3     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
6Q2KV56    153   RNH_BORA1 Ribonuclease H OS=Bordetella avium ...1670.00000000004     64.3     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
7Q46Z81    145   RNH_CUPPJ Ribonuclease H OS=eutrophus) (Ralst...1670.00000000006     63.5     32     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
8Q17XJ7    143   RNH_HELAH Ribonuclease H OS=Helicobacter acin...1650.00000000008     63.5     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
9Q21YF6    149   RNH_RHOFD Ribonuclease H OS=Rhodoferax ferrir...1610.0000000001     63.2     29     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
10A1WFG9    155   RNH_VEREI Ribonuclease H OS=Verminephrobacter...1590.0000000001     63.2     30     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
11P56120    143   RNH_HELPY Ribonuclease HI OS=pylori). GN=rnhA...1660.0000000002     62     30     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
12Q0K8W6    145   RNH_CUPNH Ribonuclease H OS=(Ralstonia eutrop...1700.0000000003     61.6     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
13A6V705    148   RNH_PSEA7 Ribonuclease H OS=Pseudomonas aerug...1670.0000000003     61.6     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
14Q9I2S9    148   RNH_PSEAE Ribonuclease HI OS=12228). GN=rnhA ...1670.0000000004     61.2     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
15Q02KV8    148   RNH_PSEAB Ribonuclease H OS=Pseudomonas aerug...1670.0000000004     61.2     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
16B7VB62    148   RNH_PSEA8 Ribonuclease H OS=Pseudomonas aerug...1670.0000000004     61.2     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
17Q7VRX8    155   RNH_BORPE Ribonuclease H OS=Bordetella pertus...1630.0000000005     61.2     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
18Q7WCJ8    155   RNH_BORBR Ribonuclease H OS=(Alcaligenes bron...1630.0000000005     61.2     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
19Q1I7T4    148   RNH_PSEE4 Ribonuclease H OS=Pseudomonas entom...1690.0000000005     61.2     30     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
20Q1LL89    145   RNH_RALME Ribonuclease H OS=Ralstonia metalli...1630.000000001     60.5     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
21B8DIU7    156   RNH_DESVM Ribonuclease H OS=Desulfovibrio vul...1690.000000001     60.1     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
22Q12B88    159   RNH_POLSJ Ribonuclease H OS=Polaromonas sp. (...1620.000000003     58.9     31     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
23Q82XV8    161   RNH_NITEU Ribonuclease H OS=Nitrosomonas euro...1650.000000003     58.9     32     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
24A4VLR0    151   RNH_PSEU5 Ribonuclease H OS=Pseudomonas stutz...1730.000000003     58.9     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
25Q74BH0    149   RNH_GEOSL Ribonuclease H OS=Geobacter sulfurr...1640.000000004     58.5     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
26A1W6Q8    148   RNH_ACISJ Ribonuclease H OS=Acidovorax sp. (s...1600.000000004     58.5     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
27A1VMW5    161   RNH_POLNA Ribonuclease H OS=Polaromonas napht...1590.000000004     58.5     29     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
28Q1H190    151   RNH_METFK Ribonuclease H OS=Methylobacillus f...1750.000000004     58.5     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
29A1VFS4    156   RNH_DESVV Ribonuclease H OS=Desulfovibrio vul...1810.000000005     58.2     30     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
30Q72E89    156   RNH_DESVH Ribonuclease H OS=8303). GN=rnhA Or...1810.000000005     58.2     30     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.
31O60930    286   RNH1_HUMAN Ribonuclease H1 OS=Homo sapiens (H...2750.0000001     55.8     25     39
GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0006401; P:RNA catabolic process; TAS:ProtInc.
records
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