rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q05024 | 226 | TRI1_YEAST Protein TRI1 OS=Saccharomyces cere... | 226 | 3e-160 | 449 | 100 | 100 | GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 2 | Q08747 | 228 | UAF30_YEAST Upstream activation factor subuni... | 199 | 1e-45 | 157 | 41 | 62 | GO:0000500; C:RNA polymerase I upstream activating factor complex; IDA:SGD. | | | | | | | | | | GO:0001165; F:RNA polymerase I upstream control element sequence-specific DNA binding; IDA:SGD. | | | | | | | | | | GO:0006325; P:chromatin organization; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD. | 3 | O74503 | 233 | UAF30_SCHPO Upstream activation factor subuni... | 193 | 1e-24 | 102 | 35 | 57 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0000500; C:RNA polymerase I upstream activating factor complex; TAS:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006360; P:transcription from RNA polymerase I promoter; TAS:PomBase. | 4 | Q9FMT4 | 534 | SNF12_ARATH SWI/SNF complex component SNF12 h... | 136 | 0.0000001 | 55.1 | 31 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 5 | Q61466 | 515 | SMRD1_MOUSE SWI/SNF-related matrix-associated... | 95 | 0.000004 | 50.4 | 33 | 51 | GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 6 | Q96GM5 | 515 | SMRD1_HUMAN SWI/SNF-related matrix-associated... | 95 | 0.000009 | 49.3 | 32 | 51 | GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB. | | | | | | | | | | GO:0032947; F:protein complex scaffold; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL. | | | | | | | | | | GO:0048096; P:chromatin-mediated maintenance of transcription; IMP:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL. | 7 | Q2TBN1 | 515 | SMRD1_BOVIN SWI/SNF-related matrix-associated... | 72 | 0.00001 | 49.3 | 33 | 57 | GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 8 | Q9SIV5 | 1773 | C3H19_ARATH Zinc finger CCCH domain-containin... | 110 | 0.0003 | 45.4 | 31 | 50 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 9 | Q9P7S3 | 425 | SSR3_SCHPO SWI/SNF and RSC complexes subunit ... | 69 | 0.0004 | 44.7 | 35 | 49 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase. | | | | | | | | | | GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase. | 10 | Q6P9Z1 | 483 | SMRD3_MOUSE SWI/SNF-related matrix-associated... | 97 | 0.0005 | 43.9 | 32 | 51 | GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0003219; P:cardiac right ventricle formation; IMP:MGI.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042692; P:muscle cell differentiation; IMP:MGI.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.::GO:0043393; P:regulation of protein binding; IDA:MGI.::GO:0003139; P:secondary heart field specification; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 11 | Q6STE5 | 483 | SMRD3_HUMAN SWI/SNF-related matrix-associated... | 97 | 0.0005 | 43.9 | 32 | 51 | GO:0005737; C:cytoplasm; IDA:BHF-UCL.::GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0016514; C:SWI/SNF complex; NAS:UniProtKB. | | | | | | | | | | GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:BHF-UCL.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IMP:BHF-UCL.::GO:0035257; F:nuclear hormone receptor binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:UniProtKB. | | | | | | | | | | GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0002052; P:positive regulation of neuroblast proliferation; IDA:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB. | 12 | Q9SD34 | 1292 | C3H44_ARATH Zinc finger CCCH domain-containin... | 83 | 0.004 | 41.6 | 28 | 54 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016570; P:histone modification; IEA:InterPro.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro. | 13 | Q5UQ74 | 335 | YR508_MIMIV Putative SWIB domain-containing p... | 64 | 0.02 | 38.9 | 28 | 64 | | | | | | | | | | | | | | | | | | | | | | 14 | Q92925 | 531 | SMRD2_HUMAN SWI/SNF-related matrix-associated... | 95 | 0.03 | 38.9 | 29 | 46 | GO:0016514; C:SWI/SNF complex; IDA:UniProtKB. | | | | | | | | | | GO:0003713; F:transcription coactivator activity; NAS:UniProtKB. | | | | | | | | | | GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 15 | Q99JR8 | 531 | SMRD2_MOUSE SWI/SNF-related matrix-associated... | 95 | 0.032 | 38.5 | 29 | 46 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 16 | O54772 | 531 | SMRD2_RAT SWI/SNF-related matrix-associated a... | 95 | 0.032 | 38.5 | 29 | 46 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 17 | E1BJD1 | 531 | SMRD2_BOVIN SWI/SNF-related matrix-associated... | 95 | 0.035 | 38.5 | 29 | 46 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 18 | Q9FT92 | 553 | Y5843_ARATH Uncharacterized protein At5g08430... | 59 | 0.09 | 37.4 | 34 | 61 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0016570; P:histone modification; IEA:InterPro.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro. | 19 | Q91FL8 | 312 | VF306_IIV6 Putative SWIB domain-containing pr... | 48 | 0.27 | 35.4 | 38 | 63 | | | | | | | | | | | | | | | | | | | | | | 20 | P38333 | 483 | ENP1_YEAST Essential nuclear protein 1 OS=Sac... | 46 | 0.83 | 34.3 | 41 | 67 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0030688; C:preribosome, small subunit precursor; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IDA:SGD. | | | | | | | | | | GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD. | 21 | P29146 | 793 | NECA_HYDVU PC3-like endoprotease variant A OS... | 176 | 0.9 | 34.3 | 24 | 43 | | | | | | | | | | | GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro. | | | | | | | | | | GO:0006508; P:proteolysis; IEA:UniProtKB-KW. | 22 | Q556Z0 | 456 | SNF12_DICDI SWI/SNF complex component SNF12 h... | 55 | 1.2 | 33.5 | 33 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 23 | Q9ZI49 | 199 | RL4_AQUPY 50S ribosomal protein L4 OS=Aquifex... | 63 | 3 | 32 | 33 | 59 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 24 | Q6PDZ2 | 836 | TAF1C_MOUSE TATA box-binding protein-associat... | 134 | 3.2 | 32.3 | 25 | 43 | GO:0000120; C:RNA polymerase I transcription factor complex; TAS:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006360; P:transcription from RNA polymerase I promoter; TAS:MGI. | 25 | Q6P1C1 | 489 | IPPK_MOUSE Inositol-pentakisphosphate 2-kinas... | 64 | 5.4 | 31.6 | 25 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0035299; F:inositol pentakisphosphate 2-kinase activity; ISS:HGNC. | | | | | | | | | | GO:0052746; P:inositol phosphorylation; ISS:BHF-UCL. | 26 | A3QDZ3 | 609 | UVRC_SHELP UvrABC system protein C OS=Shewane... | 44 | 6.3 | 31.6 | 39 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0009380; C:excinuclease repair complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW. | 27 | Q52G60 | 773 | CEF1_MAGO7 Pre-mRNA-splicing factor CEF1 OS=b... | 65 | 6.5 | 31.6 | 28 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 28 | Q196Z0 | 282 | VF306_IIV3 Putative SWIB domain-containing pr... | 71 | 8.9 | 30.8 | 32 | 52 | | | | | | | | | | | | | | | | | | | | | |