Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR228W
Length:
341
Number of sequences:
5887
Description:
YMR228W MTF1 SGDID:S000004841, Chr XIII from 724626-725651, Genome Release 64-1-1, Verified ORF, "Mitochondrial RNA polymerase specificity factor with structural similarity to S-adenosylmethionine-dependent methyltransferases and functional similarity to bacterial sigma-factors, interacts with mitochondrial core polymerase Rpo41p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P14908    341   MTF1_YEAST Mitochondrial transcription factor...3410     706     100     100GO:0034245; C:mitochondrial DNA-directed RNA polymerase complex; IDA:SGD.::GO:0005758; C:mitochondrial intermembrane space; IDA:SGD.::GO:0005759; C:mitochondrial matrix; IDA:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0034246; F:mitochondrial RNA polymerase binding promoter specificity activity; IDA:SGD.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q9Y829    341   MTF1_SACDO Mitochondrial transcription factor...3410     680     94     99GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3P87292    338   MTF1_LACKL Mitochondrial transcription factor...3368e-145     419     57     76GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4P87250    335   MTF1_KLULA Mitochondrial transcription factor...3231e-79     253     41     62GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q9US51    366   MTF1_SCHPO Mitochondrial transcription factor...3262e-27     114     28     49GO:0005759; C:mitochondrial matrix; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0001018; F:mitochondrial RNA polymerase regulatory region DNA binding; IDA:PomBase.::GO:0001012; F:RNA polymerase II regulatory region DNA binding; IDA:PomBase.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:PomBase.::GO:0006390; P:transcription from mitochondrial promoter; IMP:PomBase.
6Q1A705    343   TFB1M_HARVE Dimethyladenosine transferase 1, ...1920.0004     45.4     20     40GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q2TBQ0    341   TFB1M_BOVIN Mitochondrial dimethyladenosine t...2120.002     43.1     25     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q9RDV3    234   TRMD_MYCGA tRNA (guanine-N(1)-)-methyltransfe...1540.033     38.9     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0052906; F:tRNA (guanine(37)-N(1))-methyltransferase activity; IEA:EC.
9Q811P6    345   TFB1M_RAT Dimethyladenosine transferase 1, mi...690.037     39.3     29     51
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q5R4V9    343   TFB1M_PONAB Dimethyladenosine transferase 1, ...710.18     37     27     49GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q8WVM0    346   TFB1M_HUMAN Dimethyladenosine transferase 1, ...710.19     37     27     49GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q2PG46    345   TFB1M_MACFA Dimethyladenosine transferase 1, ...710.22     37     27     49GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q8JZM0    345   TFB1M_MOUSE Dimethyladenosine transferase 1, ...690.89     35     26     49
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q28HM1    346   TFB1M_XENTR Dimethyladenosine transferase 1, ...691     34.7     23     48GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q7T0W5    344   TFB1M_XENLA Dimethyladenosine transferase 1, ...691.3     34.3     23     48GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q62261    2363   SPTB2_MOUSE Spectrin beta chain, brain 1 OS=M...1082.7     33.9     30     44GO:0032437; C:cuticular plate; IDA:MGI.::GO:0031430; C:M band; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:MGI.::GO:0008091; C:spectrin; IEA:InterPro.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0005200; F:structural constituent of cytoskeleton; IEA:InterPro.
GO:0051693; P:actin filament capping; IEA:UniProtKB-KW.::GO:0007182; P:common-partner SMAD protein phosphorylation; IDA:MGI.::GO:0007184; P:SMAD protein import into nucleus; IDA:MGI.
17Q01082    2364   SPTB2_HUMAN Spectrin beta chain, brain 1 OS=H...1082.8     33.9     30     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0031430; C:M band; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:HGNC.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0008091; C:spectrin; TAS:ProtInc.
GO:0003779; F:actin binding; TAS:ProtInc.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0005200; F:structural constituent of cytoskeleton; TAS:ProtInc.
GO:0051693; P:actin filament capping; IEA:UniProtKB-KW.::GO:0007411; P:axon guidance; TAS:Reactome.
18Q94IN5    1803   PNO_EUGGR Pyruvate dehydrogenase [NADP(+)], m...626     32.7     32     50GO:0005739; C:mitochondrion; IDA:UniProtKB.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0050444; F:aquacobalamin reductase (NADPH) activity; IEA:EC.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0010181; F:FMN binding; IEA:InterPro.::GO:0005506; F:iron ion binding; IEA:InterPro.::GO:0050243; F:pyruvate dehydrogenase (NADP+) activity; IEA:EC.::GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
GO:0045333; P:cellular respiration; IDA:UniProtKB.::GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006090; P:pyruvate metabolic process; IDA:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.
19A5GQQ5    331   OBG_SYNR3 GTPase obg OS=Synechococcus sp. (st...437.7     32     35     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0000287; F:magnesium ion binding; IEA:InterPro.
records
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