Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR190C
Length:
1447
Number of sequences:
5887
Description:
YMR190C SGS1 SGDID:S000004802, Chr XIII from 645258-640915, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar DNA helicase of the RecQ family; involved in genome integrity maintenance; regulates chromosome synapsis and meiotic joint molecule/crossover formation; potential role as repressor of a subset of rapamycin responsive genes; rapidly lost in response to rapamycin in Rrd1p-dependent manner; similar to human BLM and WRN proteins implicated in Bloom and Werner syndromes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841A5DUB2    855   MAK5_LODEL ATP-dependent RNA helicase MAK5 OS...1060.012     43.9     22     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
842A5DY34    686   DRS1_LODEL ATP-dependent RNA helicase DRS1 OS...4060.012     43.9     21     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
843P41382    413   IF410_TOBAC Eukaryotic initiation factor 4A-1...1330.012     43.5     23     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
844O13622    535   MS116_SCHPO ATP-dependent RNA helicase mss116...710.012     43.5     28     49GO:0005759; C:mitochondrial matrix; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0032543; P:mitochondrial translation; NAS:PomBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; ISS:PomBase.
845Q10MH8    770   RH24_ORYSJ DEAD-box ATP-dependent RNA helicas...3330.012     43.9     18     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
846Q54TD7    940   DDX24_DICDI ATP-dependent RNA helicase ddx24 ...630.012     43.9     35     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
847Q80Y44    875   DDX10_MOUSE Probable ATP-dependent RNA helica...3800.013     43.9     22     36
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
848P67425    663   UVRB_STAAN UvrABC system protein B OS=Staphyl...1220.014     43.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
849P67424    663   UVRB_STAAM UvrABC system protein B OS=Staphyl...1220.014     43.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
850Q6GIN3    663   UVRB_STAAR UvrABC system protein B OS=Staphyl...1220.014     43.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
851Q5HHR0    663   UVRB_STAAC UvrABC system protein B OS=Staphyl...1220.014     43.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
852P37474    1177   MFD_BACSU Transcription-repair-coupling facto...940.014     43.9     29     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
853G2TRN7    147   YM06_SCHPO RecQ DNA helicase-like protein C21...400.014     41.2     45     60
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.
854Q8NXM0    663   UVRB_STAAW UvrABC system protein B OS=Staphyl...1220.014     43.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
855Q6GB72    663   UVRB_STAAS UvrABC system protein B OS=Staphyl...1220.014     43.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
856A2VD92    740   DDX1_XENLA ATP-dependent RNA helicase DDX1 OS...1570.014     43.5     24     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0072669; C:tRNA-splicing ligase complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; ISS:UniProtKB.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0033677; F:DNA/RNA helicase activity; ISS:UniProtKB.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.::GO:0003712; F:transcription cofactor activity; ISS:UniProtKB.
GO:0032508; P:DNA duplex unwinding; ISS:UniProtKB.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
857A3LST5    433   SUB2_PICST ATP-dependent RNA helicase SUB2 OS...1270.014     43.1     24     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
858Q5UYM9    799   HELS_HALMA Putative ski2-type helicase OS=B-1...3890.015     43.5     21     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:InterPro.
859Q5VRY0    625   RH39_ORYSJ DEAD-box ATP-dependent RNA helicas...3910.015     43.5     22     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
860A3LNR6    567   HAS1_PICST ATP-dependent RNA helicase HAS1 OS...3470.015     43.5     20     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
861Q40470    413   IF4A7_TOBAC Eukaryotic initiation factor 4A-7...1330.016     43.1     23     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
862Q9FNM7    850   RH26_ARATH DEAD-box ATP-dependent RNA helicas...3470.016     43.5     22     36GO:0009507; C:chloroplast; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
863P0CR00    484   RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 O...1100.016     43.1     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
864P0CR01    484   RRP3_CRYNB ATP-dependent rRNA helicase RRP3 O...1100.016     43.1     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
865Q9ZBD8    920   HELY_MYCLE Probable helicase helY OS=Mycobact...760.016     43.5     37     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
866Q5BFU1    812   DBP4_EMENI ATP-dependent RNA helicase dbp4 OS...3370.017     43.5     21     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
867Q54VT4    546   DDX47_DICDI Probable ATP-dependent RNA helica...1100.017     43.1     24     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
868Q54VF1    685   DDX56_DICDI Probable ATP-dependent RNA helica...2960.019     43.1     21     41GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000027; P:ribosomal large subunit assembly; ISS:dictyBase.::GO:0006364; P:rRNA processing; ISS:dictyBase.
869Q39189    671   RH7_ARATH DEAD-box ATP-dependent RNA helicase...1520.019     43.1     21     41GO:0005730; C:nucleolus; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; TAS:TAIR.
870A4IG62    763   SUV3_DANRE ATP-dependent RNA helicase SUPV3L1...1460.019     43.1     27     44GO:0045025; C:mitochondrial degradosome; ISS:UniProtKB.::GO:0042645; C:mitochondrial nucleoid; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0034458; F:3'-5' RNA helicase activity; ISS:UniProtKB.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003677; F:DNA binding; ISS:UniProtKB.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0003725; F:double-stranded RNA binding; ISS:UniProtKB.
GO:0006916; P:anti-apoptosis; ISS:UniProtKB.::GO:0070827; P:chromatin maintenance; ISS:UniProtKB.::GO:0006310; P:DNA recombination; ISS:UniProtKB.::GO:0000958; P:mitochondrial mRNA catabolic process; ISS:UniProtKB.::GO:0035946; P:mitochondrial mRNA surveillance; ISS:UniProtKB.::GO:0035945; P:mitochondrial ncRNA surveillance; ISS:UniProtKB.::GO:0000965; P:mitochondrial RNA 3'-end processing; ISS:UniProtKB.::GO:0070584; P:mitochondrion morphogenesis; ISS:UniProtKB.::GO:0030307; P:positive regulation of cell growth; ISS:UniProtKB.::GO:0000962; P:positive regulation of mitochondrial RNA catabolic process; ISS:UniProtKB.
871Q6P9R1    639   DDX51_MOUSE ATP-dependent RNA helicase DDX51 ...820.02     43.1     27     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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