Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR190C
Length:
1447
Number of sequences:
5887
Description:
YMR190C SGS1 SGDID:S000004802, Chr XIII from 645258-640915, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar DNA helicase of the RecQ family; involved in genome integrity maintenance; regulates chromosome synapsis and meiotic joint molecule/crossover formation; potential role as repressor of a subset of rapamycin responsive genes; rapidly lost in response to rapamycin in Rrd1p-dependent manner; similar to human BLM and WRN proteins implicated in Bloom and Werner syndromes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571Q5R7D1    942   DDX42_PONAB ATP-dependent RNA helicase DDX42 ...4280.00006     51.2     21     40GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008104; P:protein localization; ISS:UniProtKB.::GO:0045767; P:regulation of anti-apoptosis; ISS:UniProtKB.
572P38712    501   RRP3_YEAST ATP-dependent rRNA helicase RRP3 O...3480.00006     50.8     22     40GO:0005730; C:nucleolus; TAS:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
573Q07478    446   SUB2_YEAST ATP-dependent RNA helicase SUB2 OS...2480.00007     50.8     23     46GO:0000781; C:chromosome, telomeric region; IPI:SGD.::GO:0005681; C:spliceosomal complex; TAS:SGD.::GO:0000346; C:transcription export complex; IPI:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IGI:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0031124; P:mRNA 3'-end processing; IMP:SGD.::GO:0006406; P:mRNA export from nucleus; IDA:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD.
574Q61496    702   DDX4_MOUSE Probable ATP-dependent RNA helicas...3620.00007     51.2     20     38GO:0033391; C:chromatoid body; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0048471; C:perinuclear region of cytoplasm; IDA:MGI.::GO:0071546; C:pi-body; IDA:UniProtKB.::GO:0071547; C:piP-body; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000237; P:leptotene; IMP:MGI.::GO:0007141; P:male meiosis I; IMP:MGI.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0032880; P:regulation of protein localization; IMP:MGI.::GO:0007283; P:spermatogenesis; IMP:MGI.
575A6ZXP4    446   SUB2_YEAS7 ATP-dependent RNA helicase SUB2 OS...2480.00007     50.8     23     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
576A7TLA0    441   SUB21_VANPO ATP-dependent RNA helicase SUB2-1...2350.00007     50.8     23     45GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
577A5DZX2    511   DBP5_LODEL ATP-dependent RNA helicase DBP5 OS...1240.00007     50.8     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
578Q6FPT7    765   DBP4_CANGA ATP-dependent RNA helicase DBP4 OS...3370.00007     51.2     23     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
579Q8L7S8    748   RH3_ARATH DEAD-box ATP-dependent RNA helicase...1330.00007     51.2     24     44GO:0009941; C:chloroplast envelope; IDA:TAIR.::GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
580A3GH91    500   DBP5_PICST ATP-dependent RNA helicase DBP5 OS...1230.00008     50.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
581Q5GUR8    574   RHLB_XANOR ATP-dependent RNA helicase rhlB OS...3450.00008     50.8     20     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
582Q8P4D4    573   RHLB_XANCP ATP-dependent RNA helicase rhlB OS...3450.00009     50.8     20     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
583B0RWT6    573   RHLB_XANCB ATP-dependent RNA helicase rhlB OS...3450.00009     50.8     20     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
584Q4UPY5    573   RHLB_XANC8 ATP-dependent RNA helicase rhlB OS...3450.00009     50.8     20     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
585Q12WZ6    760   HELS_METBU Putative ski2-type helicase OS=Met...3740.00009     50.8     22     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:InterPro.
586Q0DM51    758   RH3_ORYSJ DEAD-box ATP-dependent RNA helicase...3630.00009     50.8     21     39GO:0005634; C:nucleus; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
587Q84W89    633   RH37_ARATH DEAD-box ATP-dependent RNA helicas...3640.00009     50.8     19     39GO:0005777; C:peroxisome; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
588Q0SYX0    421   RHLB_SHIF8 ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
589Q91VN6    622   DDX41_MOUSE Probable ATP-dependent RNA helica...1010.00009     50.8     25     46GO:0005783; C:endoplasmic reticulum; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0035458; P:cellular response to interferon-beta; IMP:MGI.::GO:0051607; P:defense response to virus; IMP:MGI.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
590Q6GVM6    660   DDX3Y_PANTR ATP-dependent RNA helicase DDX3Y ...1130.00009     50.8     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
591Q4I7K4    675   DED1_GIBZE ATP-dependent RNA helicase DED1 OS...4410.00009     50.8     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
592Q3YVI4    421   RHLB_SHISS ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
593P0A8K0    421   RHLB_SHIFL ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
594Q1R4F9    421   RHLB_ECOUT ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
595B6I4B6    421   RHLB_ECOSE ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
596P0A8J8    421   RHLB_ECOLI ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IDA:EcoCyc.
597B1IWC0    421   RHLB_ECOLC ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
598P0A8J9    421   RHLB_ECOL6 ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
599Q0TAU3    421   RHLB_ECOL5 ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
600A1AHV0    421   RHLB_ECOK1 ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
601A8A6N4    421   RHLB_ECOHS ATP-dependent RNA helicase rhlB OS...3740.00009     50.4     20     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
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