Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR156C
Length:
238
Number of sequences:
5887
Description:
YMR156C TPP1 SGDID:S000004765, Chr XIII from 571016-570300, Genome Release 64-1-1, reverse complement, Verified ORF, "DNA 3'-phosphatase that functions in repair of endogenous damage of double-stranded DNA, activity is specific for removal of 3' phosphates at strand breaks; has similarity to the l-2-haloacid dehalogenase superfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q03796    238   TPP1_YEAST Polynucleotide 3'-phosphatase OS=S...2383e-177     493     100     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046403; F:polynucleotide 3'-phosphatase activity; IDA:SGD.
GO:0006281; P:DNA repair; IDA:SGD.
2Q9HET9    245   TPP1_SACMI Polynucleotide 3'-phosphatase OS=S...2383e-128     370     75     83GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046403; F:polynucleotide 3'-phosphatase activity; IEA:EC.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
3O13911    408   PNK1_SCHPO Bifunctional polynucleotide phosph...2060.000000000000002     77.8     32     48GO:0005730; C:nucleolus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IDA:PomBase.::GO:0046403; F:polynucleotide 3'-phosphatase activity; IDA:PomBase.
GO:0000718; P:nucleotide-excision repair, DNA damage removal; IDA:PomBase.
4Q5UQD2    421   PNKP_MIMIV Putative bifunctional polynucleoti...2630.0000008     52.8     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0046403; F:polynucleotide 3'-phosphatase activity; IEA:EC.
5P21286    182   Y033_NPVAC Uncharacterized 20.8 kDa protein i...2130.00001     48.1     27     40
6Q9JLV6    522   PNKP_MOUSE Bifunctional polynucleotide phosph...2150.00006     47     26     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IEA:EC.::GO:0046403; F:polynucleotide 3'-phosphatase activity; IEA:EC.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
7Q96T60    521   PNKP_HUMAN Bifunctional polynucleotide phosph...2150.0001     46.2     24     38GO:0005730; C:nucleolus; IDA:HPA.
GO:0005524; F:ATP binding; NAS:UniProtKB.::GO:0046404; F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; IDA:UniProtKB.::GO:0003684; F:damaged DNA binding; NAS:UniProtKB.::GO:0003690; F:double-stranded DNA binding; TAS:UniProtKB.::GO:0004519; F:endonuclease activity; NAS:UniProtKB.::GO:0019201; F:nucleotide kinase activity; IDA:UniProtKB.::GO:0046403; F:polynucleotide 3'-phosphatase activity; IDA:UniProtKB.
GO:0042769; P:DNA damage response, detection of DNA damage; IDA:UniProtKB.::GO:0006261; P:DNA-dependent DNA replication; NAS:UniProtKB.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; NAS:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.::GO:0009314; P:response to radiation; NAS:UniProtKB.
8Q19683    407   YZR5_CAEEL Uncharacterized protein F21D5.5 OS...2160.002     42.7     29     39
GO:0003690; F:double-stranded DNA binding; IDA:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0019915; P:lipid storage; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.
9B6SEH8    477   ERVV1_HUMAN HERV-V_19q13.41 provirus ancestra...431.3     33.9     40     60GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
10Q54UV7    890   Y0811_DICDI UPF0746 protein DDB_G0280811 OS=D...1212.5     33.1     26     45
11Q5EBF1    568   5NTC_XENTR Cytosolic purine 5'-nucleotidase O...803.8     32.3     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008253; F:5'-nucleotidase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0009117; P:nucleotide metabolic process; IEA:UniProtKB-KW.
12Q568L5    324   A1A1B_DANRE Alcohol dehydrogenase [NADP(+)] B...584.3     32     29     55
GO:0008106; F:alcohol dehydrogenase (NADP+) activity; IEA:EC.
13Q2QCI8    2173   MED12_DANRE Mediator of RNA polymerase II tra...1135.1     32     24     40GO:0016592; C:mediator complex; IEA:InterPro.
GO:0008013; F:beta-catenin binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
GO:0048702; P:embryonic neurocranium morphogenesis; IMP:ZFIN.::GO:0035118; P:embryonic pectoral fin morphogenesis; IMP:ZFIN.::GO:0048703; P:embryonic viscerocranium morphogenesis; IMP:ZFIN.::GO:0007492; P:endoderm development; IMP:ZFIN.::GO:0030900; P:forebrain development; IMP:ZFIN.::GO:0050935; P:iridophore differentiation; IMP:ZFIN.::GO:0001822; P:kidney development; IMP:ZFIN.::GO:0030901; P:midbrain development; IMP:ZFIN.::GO:0014032; P:neural crest cell development; IMP:ZFIN.::GO:0030182; P:neuron differentiation; IMP:ZFIN.::GO:0002761; P:regulation of myeloid leukocyte differentiation; IMP:ZFIN.
14Q589A6    2223   YCF2_SILLA Protein ycf2 OS=Silene latifolia (...609.9     31.2     27     50GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
records
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