Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
991Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...844     33.1     21     45GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
992Q08122    772   TLE3_MOUSE Transducin-like enhancer protein 3...670.68     35.8     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
993Q04726    772   TLE3_HUMAN Transducin-like enhancer protein 3...670.68     35.8     27     45GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
994Q96DN5    1066   WDR67_HUMAN WD repeat-containing protein 67 O...820.68     35.8     28     50GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0005622; C:intracellular; IEA:InterPro.
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
995Q8L4M1    367   DWA1_ARATH WD repeat-containing protein DWA1 ...630.69     35.4     29     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0010267; P:production of ta-siRNAs involved in RNA interference; IMP:TAIR.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.
996Q9JIT3    764   TLE3_RAT Transducin-like enhancer protein 3 O...670.69     35.4     27     45GO:0005634; C:nucleus; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0006355; P:regulation of transcription, DNA-dependent; IDA:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
997Q5RD21    944   WDR67_PONAB WD repeat-containing protein 67 O...740.7     35.8     28     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
998Q54SD4    423   RBBD_DICDI Probable histone-binding protein r...2050.71     35.4     25     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
999Q5RF24    485   WDR13_PONAB WD repeat-containing protein 13 O...1650.71     35.4     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
1000O13166    761   TLE2_DANRE Protein groucho-2 OS=Danio rerio (...670.72     35.4     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 1000 991 - 1000
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::