Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
961Q24572    430   CAF1_DROME Probable histone-binding protein C...830.47     35.8     28     52GO:0033186; C:CAF-1 complex; IDA:FlyBase.::GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0031523; C:Myb complex; IDA:FlyBase.::GO:0016581; C:NuRD complex; IDA:FlyBase.::GO:0016589; C:NURF complex; IPI:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0070822; C:Sin3-type complex; IDA:FlyBase.::GO:0005667; C:transcription factor complex; IPI:FlyBase.
GO:0035035; F:histone acetyltransferase binding; IPI:FlyBase.::GO:0042393; F:histone binding; IDA:FlyBase.::GO:0042826; F:histone deacetylase binding; IDA:FlyBase.::GO:0042803; F:protein homodimerization activity; IPI:FlyBase.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0000910; P:cytokinesis; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0006281; P:DNA repair; TAS:FlyBase.::GO:0007307; P:eggshell chorion gene amplification; IC:FlyBase.::GO:0016573; P:histone acetylation; IDA:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IC:GOC.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0006334; P:nucleosome assembly; IDA:FlyBase.::GO:0042766; P:nucleosome mobilization; IDA:FlyBase.::GO:0016584; P:nucleosome positioning; IDA:FlyBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:FlyBase.::GO:0007379; P:segment specification; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IDA:FlyBase.
962Q6NYH1    1187   IF122_DANRE Intraflagellar transport protein ...1504.1     33.1     21     39GO:0005929; C:cilium; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
GO:0048593; P:camera-type eye morphogenesis; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0010172; P:embryonic body morphogenesis; IMP:UniProtKB.::GO:0007507; P:heart development; IMP:UniProtKB.::GO:0008589; P:regulation of smoothened signaling pathway; IMP:UniProtKB.::GO:0072001; P:renal system development; IMP:UniProtKB.
963Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...752.6     33.5     27     51GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
964P90917    412   RBA1_CAEEL Probable histone-binding protein r...810.49     35.8     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:WormBase.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
965Q6NVE8    915   WDR44_MOUSE WD repeat-containing protein 44 O...2010.49     36.2     22     41GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
966P36037    715   DOA1_YEAST Protein DOA1 OS=Saccharomyces cere...1052.7     33.9     27     44GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006303; P:double-strand break repair via nonhomologous end joining; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
967O15213    610   WDR46_HUMAN WD repeat-containing protein 46 O...1200.5     35.8     23     43
968Q7K4B3    794   ELP2_DROME Probable elongator complex protein...1778.8     32     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
969P36104    329   SWD2_YEAST COMPASS component SWD2 OS=Saccharo...1440.51     35.8     24     40GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0034729; P:histone H3-K79 methylation; IMP:SGD.::GO:0031124; P:mRNA 3'-end processing; IMP:SGD.::GO:0031126; P:snoRNA 3'-end processing; IMP:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.::GO:0030847; P:termination of RNA polymerase II transcription, exosome-dependent; IPI:SGD.::GO:0030846; P:termination of RNA polymerase II transcription, poly(A)-coupled; IPI:SGD.
970Q54R58    918   YTYK2_DICDI Probable tyrosine-protein kinase ...900.52     36.2     27     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004715; F:non-membrane spanning protein tyrosine kinase activity; IEA:EC.
971A6QX61    788   ERB1_AJECN Ribosome biogenesis protein ERB1 O...873.8     33.1     28     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
972Q6S003    1873   KIF8_DICDI Kinesin-related protein 8 OS=Dicty...1820.55     36.2     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007018; P:microtubule-based movement; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
973Q07141    748   TLE4_RAT Transducin-like enhancer protein 4 O...910.56     35.8     23     42GO:0005634; C:nucleus; IDA:RGD.
GO:0003714; F:transcription corepressor activity; NAS:RGD.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
974Q9FNZ2    430   C3H48_ARATH Zinc finger CCCH domain-containin...1010.59     35.4     34     49
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
975Q5FW06    457   DCA10_XENTR DDB1- and CUL4-associated factor ...770.59     35.8     27     55GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
976Q5JSH3    913   WDR44_HUMAN WD repeat-containing protein 44 O...2040.61     35.8     22     41GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
977Q8BPN8    3032   DMXL2_MOUSE DmX-like protein 2 OS=Mus musculu...870.61     35.8     24     48GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0030672; C:synaptic vesicle membrane; IEA:UniProtKB-SubCell.
978Q7K0L4    630   WDR26_DROME WD repeat-containing protein 26 h...1320.62     35.8     21     43GO:0005737; C:cytoplasm; ISS:UniProtKB.
979P42935    788   ELP2_YEAST Elongator complex protein 2 OS=Sac...820.62     35.8     30     45GO:0005737; C:cytoplasm; IDA:SGD.::GO:0033588; C:Elongator holoenzyme complex; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0032447; P:protein urmylation; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
980B4JPT9    419   WDR12_DROGR Ribosome biogenesis protein WDR12...823.2     33.1     28     49GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
981P46680    615   AIP1_YEAST Actin-interacting protein 1 OS=Sac...1270.63     35.8     27     46GO:0030479; C:actin cortical patch; TAS:SGD.::GO:0043332; C:mating projection tip; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0003779; F:actin binding; IPI:UniProtKB.
GO:0030042; P:actin filament depolymerization; IPI:SGD.::GO:0006970; P:response to osmotic stress; TAS:SGD.
982P57775    412   FBXW4_HUMAN F-box/WD repeat-containing protei...990.64     35.4     29     49GO:0000151; C:ubiquitin ligase complex; NAS:UniProtKB.
GO:0030326; P:embryonic limb morphogenesis; NAS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; NAS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
983Q54MZ3    499   CDC20_DICDI Anaphase-promoting complex subuni...1040.65     35.4     24     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
984Q62440    770   TLE1_MOUSE Transducin-like enhancer protein 1...620.65     35.8     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:MGI.
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
985Q91V09    485   WDR13_MOUSE WD repeat-containing protein 13 O...1650.66     35.4     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
986Q5FVA9    368   RAE1L_XENTR mRNA export factor OS=Xenopus tro...870.66     35.4     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
987Q8T088    498   WDR55_DROME WD repeat-containing protein 55 h...710.66     35.4     31     58
988Q04724    770   TLE1_HUMAN Transducin-like enhancer protein 1...620.66     35.8     29     45
GO:0001106; F:RNA polymerase II transcription corepressor activity; IDA:BHF-UCL.::GO:0008134; F:transcription factor binding; IDA:UniProtKB.
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; IDA:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; NAS:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
989Q9XSC3    912   WDR44_BOVIN WD repeat-containing protein 44 O...2010.66     35.8     22     41GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
990Q8NI36    951   WDR36_HUMAN WD repeat-containing protein 36 O...3140.67     35.8     21     39GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:InterPro.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.
991Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...844     33.1     21     45GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
records
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