Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
931Q7SEM3    779   ERB1_NEUCR Ribosome biogenesis protein erb-1 ...300.32     36.6     50     73GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
932Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...891.2     35     24     45GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
933P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...2360.33     36.6     22     41GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
934Q28DW0    333   CIAO1_XENTR Probable cytosolic iron-sulfur pr...859     31.6     24     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
935Q04727    773   TLE4_HUMAN Transducin-like enhancer protein 4...910.33     36.6     23     42GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
936A5DBG1    790   ERB1_PICGU Ribosome biogenesis protein ERB1 O...300.34     36.6     47     70GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
937Q54TD8    833   BOP1_DICDI Ribosome biogenesis protein BOP1 h...630.34     36.6     30     57GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0043021; F:ribonucleoprotein complex binding; ISS:dictyBase.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; ISS:dictyBase.
938Q24338    425   ESC_DROME Polycomb protein esc OS=Drosophila ...760.35     36.2     30     51GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0048096; P:chromatin-mediated maintenance of transcription; NAS:UniProtKB.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IMP:FlyBase.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
939O42478    772   TLE4_XENLA Transducin-like enhancer protein 4...910.36     36.6     23     42GO:0017053; C:transcriptional repressor complex; IPI:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IGI:UniProtKB.
GO:0001707; P:mesoderm formation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
940Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...790.7     35.4     24     47GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
941Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...1368.5     32     22     43
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
942Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...1680.87     35     19     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
943Q0DYP5    435   C3H17_ORYSJ Zinc finger CCCH domain-containin...2322.1     33.9     22     40
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
944Q62441    773   TLE4_MOUSE Transducin-like enhancer protein 4...910.37     36.6     23     42GO:0005634; C:nucleus; IC:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0070491; F:repressing transcription factor binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IDA:MGI.
945A2AKB9    566   DCA10_MOUSE DDB1- and CUL4-associated factor ...780.37     36.2     28     54GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
946Q5QP82    559   DCA10_HUMAN DDB1- and CUL4-associated factor ...780.37     36.2     28     54GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
947Q86JF2    4118   LVSB_DICDI BEACH domain-containing protein lv...990.37     36.6     24     43GO:0005768; C:endosome; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005764; C:lysosome; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0009267; P:cellular response to starvation; IMP:dictyBase.::GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0006887; P:exocytosis; IMP:dictyBase.::GO:0007041; P:lysosomal transport; IMP:dictyBase.::GO:0007040; P:lysosome organization; IMP:dictyBase.::GO:0001845; P:phagolysosome assembly; IMP:dictyBase.::GO:0006970; P:response to osmotic stress; IMP:dictyBase.
948Q68EI0    431   WDR18_DANRE WD repeat-containing protein 18 O...840.43     36.2     26     42
GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; IMP:UniProtKB.
949Q9JMJ2    410   FBXW4_MOUSE F-box/WD repeat-containing protei...990.38     36.2     29     49
GO:0051216; P:cartilage development; IMP:MGI.::GO:0042733; P:embryonic digit morphogenesis; IMP:MGI.::GO:0002053; P:positive regulation of mesenchymal cell proliferation; IMP:MGI.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
950P49177    377   GBB_ARATH Guanine nucleotide-binding protein ...2375.8     32.3     24     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005783; C:endoplasmic reticulum; IDA:TAIR.::GO:0005834; C:heterotrimeric G-protein complex; IPI:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009817; P:defense response to fungus, incompatible interaction; IMP:TAIR.::GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:TAIR.::GO:0010154; P:fruit development; IMP:TAIR.::GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.::GO:0048527; P:lateral root development; IMP:TAIR.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0009887; P:organ morphogenesis; IMP:TAIR.::GO:0072593; P:reactive oxygen species metabolic process; IMP:TAIR.::GO:0009723; P:response to ethylene stimulus; IMP:TAIR.::GO:0009845; P:seed germination; IEP:UniProtKB.
951Q6CGP9    532   PFS2_YARLI Polyadenylation factor subunit 2 O...1280.4     36.2     27     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
952B2AY28    784   ERB1_PODAN Ribosome biogenesis protein ERB1 O...301.3     34.7     43     70GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
953Q05BC3    814   EMAL1_MOUSE Echinoderm microtubule-associated...768     32.3     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
954O43818    475   U3IP2_HUMAN U3 small nucleolar RNA-interactin...770.4     36.2     27     48GO:0030532; C:small nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005732; C:small nucleolar ribonucleoprotein complex; TAS:ProtInc.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; TAS:ProtInc.
955Q9D2V7    922   CORO7_MOUSE Coronin-7 OS=Mus musculus (Mouse)...1640.41     36.2     21     43GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
956O13286    556   SRW1_SCHPO WD repeat-containing protein srw1 ...663.9     33.1     27     52GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0030996; P:cell cycle arrest in response to nitrogen starvation; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0045736; P:negative regulation of cyclin-dependent protein kinase activity; IC:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.
957Q9R037    908   WDR44_RAT WD repeat-containing protein 44 OS=...2040.43     36.2     22     41GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IDA:RGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.
GO:0017137; F:Rab GTPase binding; IDA:RGD.
GO:0030334; P:regulation of cell migration; IMP:RGD.
958Q5TTP0    1059   WDY_ANOGA WD repeat-containing protein on Y c...910.44     36.2     26     51
GO:0005509; F:calcium ion binding; IEA:InterPro.
959P41838    352   RAE1_SCHPO Poly(A)+ RNA export protein OS=Sch...2400.44     35.8     22     41GO:0055126; C:Nup82 complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:PomBase.::GO:0006606; P:protein import into nucleus; TAS:PomBase.::GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:PomBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
960Q54N86    1178   FBXAL_DICDI F-box/WD repeat-containing protei...1670.46     36.2     21     44
GO:0005488; F:binding; IEA:InterPro.
961Q24572    430   CAF1_DROME Probable histone-binding protein C...830.47     35.8     28     52GO:0033186; C:CAF-1 complex; IDA:FlyBase.::GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0031523; C:Myb complex; IDA:FlyBase.::GO:0016581; C:NuRD complex; IDA:FlyBase.::GO:0016589; C:NURF complex; IPI:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0070822; C:Sin3-type complex; IDA:FlyBase.::GO:0005667; C:transcription factor complex; IPI:FlyBase.
GO:0035035; F:histone acetyltransferase binding; IPI:FlyBase.::GO:0042393; F:histone binding; IDA:FlyBase.::GO:0042826; F:histone deacetylase binding; IDA:FlyBase.::GO:0042803; F:protein homodimerization activity; IPI:FlyBase.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0000910; P:cytokinesis; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0006281; P:DNA repair; TAS:FlyBase.::GO:0007307; P:eggshell chorion gene amplification; IC:FlyBase.::GO:0016573; P:histone acetylation; IDA:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IC:GOC.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0006334; P:nucleosome assembly; IDA:FlyBase.::GO:0042766; P:nucleosome mobilization; IDA:FlyBase.::GO:0016584; P:nucleosome positioning; IDA:FlyBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:FlyBase.::GO:0007379; P:segment specification; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IDA:FlyBase.
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