Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901P0CS47    713   PFS2_CRYNB Polyadenylation factor subunit 2 O...840.21     37.4     23     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
902Q7ZWF0    368   RAE1L_DANRE mRNA export factor OS=Danio rerio...950.21     37     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
903P0CS46    712   PFS2_CRYNJ Polyadenylation factor subunit 2 O...840.21     37.4     23     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
904A4RD35    1269   SEC31_MAGO7 Protein transport protein SEC31 O...420.21     37.4     43     57GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
905Q9VKQ3    420   WDR12_DROME Ribosome biogenesis protein WDR12...2680.22     37     24     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
906Q5FVN8    476   WSDU1_RAT WD repeat, SAM and U-box domain-con...748.6     32     28     46GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
907O00423    815   EMAL1_HUMAN Echinoderm microtubule-associated...764.2     33.1     30     54GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; TAS:ProtInc.
GO:0005509; F:calcium ion binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.
908Q4V8C3    814   EMAL1_RAT Echinoderm microtubule-associated p...763.7     33.1     30     54GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
909A6NE52    1622   K1875_HUMAN WD repeat-containing protein KIAA...730.23     37.4     26     55
910O60137    357   SWD2_SCHPO Set1 complex component swd2 OS=Sch...1210.24     36.6     26     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
911Q9VU68    608   WDR1_DROME Actin-interacting protein 1 OS=Dro...1710.24     37     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:FlyBase.
GO:0030042; P:actin filament depolymerization; IMP:FlyBase.::GO:0001736; P:establishment of planar polarity; IMP:UniProtKB.::GO:0035317; P:imaginal disc-derived wing hair organization; IMP:FlyBase.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0030834; P:regulation of actin filament depolymerization; IMP:UniProtKB.::GO:0045214; P:sarcomere organization; IMP:FlyBase.
912A5DWF4    874   ERB1_LODEL Ribosome biogenesis protein ERB1 O...301.3     34.7     43     70GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
913Q13112    559   CAF1B_HUMAN Chromatin assembly factor 1 subun...1572.8     33.5     22     40GO:0033186; C:CAF-1 complex; IDA:UniProtKB.::GO:0005813; C:centrosome; IDA:HPA.
GO:0003682; F:chromatin binding; TAS:ProtInc.::GO:0042393; F:histone binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; TAS:ProtInc.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006335; P:DNA replication-dependent nucleosome assembly; TAS:ProtInc.::GO:0006461; P:protein complex assembly; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
914Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...1367     32.3     21     43
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
915Q54WA3    316   PEX7_DICDI Peroxisomal targeting signal 2 rec...940.26     36.6     28     45GO:0005777; C:peroxisome; ISS:dictyBase.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; ISS:dictyBase.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
916O55106    780   STRN_MOUSE Striatin OS=Mus musculus (Mouse). ...2510.26     37     18     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
917Q9C2I5    487   YTM1_NEUCR Ribosome biogenesis protein ytm-1 ...720.26     37     35     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
918Q9W7F2    607   WDR1A_XENLA WD repeat-containing protein 1-A ...880.26     37     25     49GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; IDA:UniProtKB.
919Q9LXN4    1024   HIRA_ARATH Protein HIRA OS=Arabidopsis thalia...755.4     32.7     24     48GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045814; P:negative regulation of gene expression, epigenetic; TAS:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
920Q3UKJ7    513   SMU1_MOUSE WD40 repeat-containing protein SMU...850.27     36.6     22     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
921Q2TAY7    513   SMU1_HUMAN WD40 repeat-containing protein SMU...850.27     36.6     22     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
922Q76B40    513   SMU1_CRIGR WD40 repeat-containing protein SMU...850.27     36.6     22     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
923Q2TBS9    513   SMU1_BOVIN WD40 repeat-containing protein SMU...850.27     36.6     22     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
924Q99M63    513   SMU1_RAT WD40 repeat-containing protein SMU1 ...850.28     36.6     22     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
925Q6GQT6    1276   SCAP_MOUSE Sterol regulatory element-binding ...790.69     35.8     29     44GO:0005789; C:endoplasmic reticulum membrane; IDA:MGI.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0015485; F:cholesterol binding; TAS:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0008203; P:cholesterol metabolic process; IDA:MGI.::GO:0045540; P:regulation of cholesterol biosynthetic process; IMP:MGI.::GO:0042304; P:regulation of fatty acid biosynthetic process; IMP:MGI.::GO:0001666; P:response to hypoxia; IMP:MGI.::GO:0032868; P:response to insulin stimulus; IMP:MGI.
926Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...890.97     35     24     45GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
927B3N534    420   WDR12_DROER Ribosome biogenesis protein WDR12...2630.29     36.6     24     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
928Q6NRT3    513   SMU1_XENLA WD40 repeat-containing protein SMU...850.3     36.6     22     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
929Q9LJR3    845   SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...720.3     37     26     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
930Q920I9    1489   WDR7_MOUSE WD repeat-containing protein 7 OS=...930.31     37     26     46
931Q7SEM3    779   ERB1_NEUCR Ribosome biogenesis protein erb-1 ...300.32     36.6     50     73GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 901 - 930
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::