Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871O13923    601   CORO_SCHPO Coronin-like protein crn1 OS=Schiz...730.14     37.7     26     44GO:0030479; C:actin cortical patch; IDA:PomBase.::GO:0005826; C:actomyosin contractile ring; IDA:PomBase.::GO:0005885; C:Arp2/3 protein complex; ISS:RefGenome.::GO:0051286; C:cell tip; IDA:PomBase.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0051666; P:actin cortical patch localization; ISS:RefGenome.::GO:0051017; P:actin filament bundle assembly; TAS:PomBase.::GO:0030041; P:actin filament polymerization; NAS:PomBase.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; ISS:RefGenome.
872Q11176    611   WDR1_CAEEL Actin-interacting protein 1 OS=Cae...1380.48     36.2     22     46GO:0042643; C:actomyosin, actin part; IDA:WormBase.::GO:0030016; C:myofibril; IDA:WormBase.::GO:0016528; C:sarcoplasm; IDA:WormBase.
GO:0051015; F:actin filament binding; IDA:WormBase.
GO:0051016; P:barbed-end actin filament capping; ISS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0030836; P:positive regulation of actin filament depolymerization; IDA:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.
873O43815    780   STRN_HUMAN Striatin OS=Homo sapiens (Human). ...2510.15     37.7     19     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0014069; C:postsynaptic density; ISS:UniProtKB.::GO:0045211; C:postsynaptic membrane; ISS:UniProtKB.::GO:0005923; C:tight junction; IDA:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; ISS:UniProtKB.::GO:0030331; F:estrogen receptor binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
GO:0016358; P:dendrite development; ISS:UniProtKB.::GO:0007626; P:locomotory behavior; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0070830; P:tight junction assembly; NAS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
874Q499N3    431   WDR18_RAT WD repeat-containing protein 18 OS=...700.15     37.4     33     47
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
875Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...850.15     37.7     24     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
876Q4P2E9    932   ERB1_USTMA Ribosome biogenesis protein ERB1 O...380.15     37.7     39     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
877Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...1132.7     33.9     26     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
878Q8BX17    1502   GEMI5_MOUSE Gem-associated protein 5 OS=Mus m...831     35     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0017069; F:snRNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
879O43071    558   PRP17_SCHPO Pre-mRNA-processing factor 17 OS=...1300.15     37.7     26     44GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
880P70483    780   STRN_RAT Striatin OS=Rattus norvegicus (Rat)....2510.15     37.7     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0014069; C:postsynaptic density; IDA:RGD.::GO:0045211; C:postsynaptic membrane; IDA:RGD.
GO:0048306; F:calcium-dependent protein binding; NAS:RGD.::GO:0005516; F:calmodulin binding; IDA:RGD.
GO:0016358; P:dendrite development; IMP:RGD.::GO:0007626; P:locomotory behavior; IMP:RGD.
881A8PWQ8    356   CIAO1_MALGO Probable cytosolic iron-sulfur pr...2241.7     33.9     21     41
882Q32SG6    964   HIRA_MAIZE Protein HIRA OS=Zea mays (Maize). ...795     32.7     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
883Q5EA99    392   PK1IP_BOVIN p21-activated protein kinase-inte...2150.16     37.4     20     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
884P16371    730   GROU_DROME Protein groucho OS=Drosophila mela...910.16     37.7     23     43GO:0005634; C:nucleus; TAS:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0071906; F:CRD domain binding; IPI:UniProtKB.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0070491; F:repressing transcription factor binding; IGI:FlyBase.::GO:0001106; F:RNA polymerase II transcription corepressor activity; IGI:FlyBase.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045879; P:negative regulation of smoothened signaling pathway; IMP:FlyBase.::GO:0007541; P:sex determination, primary response to X:A ratio; TAS:FlyBase.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
885O88466    1888   ZF106_MOUSE Zinc finger protein 106 OS=Mus mu...682.3     34.3     32     51GO:0005829; C:cytosol; IDA:MGI.::GO:0005624; C:membrane fraction; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001515; F:opioid peptide activity; IPI:MGI.::GO:0017124; F:SH3 domain binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008286; P:insulin receptor signaling pathway; IDA:MGI.
886B9WD30    489   LIS1_CANDC Nuclear distribution protein PAC1 ...890.17     37.4     28     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
887A3LNW3    302   SEC13_PICST Protein transport protein SEC13 O...2200.17     37     26     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
888B4GMG4    503   WDR55_DROPE WD repeat-containing protein 55 h...460.17     37.4     35     65
889Q9NWT1    392   PK1IP_HUMAN p21-activated protein kinase-inte...1130.17     37.4     21     45GO:0005634; C:nucleus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
890Q294Y7    503   WDR55_DROPS WD repeat-containing protein 55 h...460.17     37.4     35     65
891B4N984    504   WDR55_DROWI WD repeat-containing protein 55 h...630.18     37.4     32     59
892Q14137    746   BOP1_HUMAN Ribosome biogenesis protein BOP1 O...700.18     37.4     31     54GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; NAS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.
893A2RRU4    1276   SCAP_RAT Sterol regulatory element-binding pr...790.22     37.4     30     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005792; C:microsome; IDA:RGD.::GO:0043234; C:protein complex; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
894P97260    1276   SCAP_CRIGR Sterol regulatory element-binding ...790.23     37.4     30     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006994; P:positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway; ISS:UniProtKB.::GO:0006993; P:sterol regulatory element binding protein import into nucleus involved in sterol depletion response; IMP:UniProtKB.
895Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...840.18     37.4     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
896Q9P7C0    524   YKU5_SCHPO Uncharacterized WD repeat-containi...570.18     37.4     32     46GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
897Q6PAX7    607   WDR1B_XENLA WD repeat-containing protein 1-B ...880.19     37.4     25     49GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
898Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...840.19     37.4     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
899P40066    365   GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces ...1020.2     37     25     43GO:0005737; C:cytoplasm; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:2000728; P:regulation of mRNA export from nucleus in response to heat stress; IMP:SGD.
900Q59VP7    849   ERB1_CANAL Ribosome biogenesis protein ERB1 O...300.68     35.8     43     70GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
901P0CS47    713   PFS2_CRYNB Polyadenylation factor subunit 2 O...840.21     37.4     23     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
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