Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841Q5RBW3    925   CORO7_PONAB Coronin-7 OS=Pongo abelii (Sumatr...1640.092     38.5     22     41GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
842Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...1571.2     34.7     19     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
843A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...870.19     37.4     29     46GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
844F4I1S7    838   ELP2_ARATH Elongator complex protein 2 OS=Ara...870.094     38.5     29     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033588; C:Elongator holoenzyme complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016746; F:transferase activity, transferring acyl groups; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0031538; P:negative regulation of anthocyanin metabolic process; IMP:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0031349; P:positive regulation of defense response; IMP:UniProtKB.::GO:2000024; P:regulation of leaf development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006979; P:response to oxidative stress; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
845B5X9P2    330   CIO1A_SALSA Probable cytosolic iron-sulfur pr...831.1     34.7     28     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
846O74340    436   DCA13_SCHPO Protein sof1 OS=Schizosaccharomyc...2870.098     38.1     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
847P90587    601   WD66_PHYPO 66 kDa stress protein OS=Physarum ...760.098     38.1     32     50
848Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...850.16     37.7     28     47GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
849Q32PJ6    339   CIAO1_BOVIN Probable cytosolic iron-sulfur pr...1252.2     33.9     22     42GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
850Q3UMY5    988   EMAL4_MOUSE Echinoderm microtubule-associated...2251.7     34.3     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
851Q08924    1013   WDR6_YEAST Regulator of Ty1 transposition pro...670.57     35.8     27     49GO:0005768; C:endosome; IDA:SGD.
GO:0032456; P:endocytic recycling; IMP:SGD.
852Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...2460.11     37.7     23     41GO:0005737; C:cytoplasm; ISS:UniProtKB.
853Q8TDJ6    3036   DMXL2_HUMAN DmX-like protein 2 OS=Homo sapien...762.7     33.9     25     47GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0030672; C:synaptic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0017137; F:Rab GTPase binding; IDA:MGI.
854Q2GXT0    484   YTM1_CHAGB Ribosome biogenesis protein YTM1 O...950.11     38.1     33     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
855Q9WVB2    767   TLE2_MOUSE Transducin-like enhancer protein 2...700.11     38.1     26     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
856B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...2073.4     33.1     21     34
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
857Q04725    743   TLE2_HUMAN Transducin-like enhancer protein 2...700.11     38.1     26     44GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
858Q06440    651   CORO_YEAST Coronin-like protein OS=Saccharomy...450.12     38.1     38     56GO:0030479; C:actin cortical patch; IDA:SGD.::GO:0005826; C:actomyosin contractile ring; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:SGD.::GO:0008017; F:microtubule binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IDA:SGD.
GO:0051666; P:actin cortical patch localization; IMP:SGD.::GO:0007015; P:actin filament organization; IMP:SGD.::GO:0007017; P:microtubule-based process; IPI:SGD.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; IDA:SGD.::GO:2000601; P:positive regulation of Arp2/3 complex-mediated actin nucleation; IDA:SGD.
859A0JPH4    1311   SCAP_XENLA Sterol regulatory element-binding ...791.1     35     29     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
860Q9SJT9    1218   COPA2_ARATH Coatomer subunit alpha-2 OS=Arabi...763.9     33.1     22     43GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
861O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...868.2     32.3     26     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
862P53851    422   TEX1_YEAST Protein TEX1 OS=Saccharomyces cere...1380.13     37.7     23     42GO:0000346; C:transcription export complex; IPI:SGD.
GO:0006406; P:mRNA export from nucleus; IC:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
863O76071    339   CIAO1_HUMAN Probable cytosolic iron-sulfur pr...831.7     33.9     28     49GO:0071817; C:MMXD complex; IDA:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; IGI:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
864Q54QU5    359   WDR89_DICDI WD repeat-containing protein 89 h...1000.13     37.7     26     49
865B6K1G6    616   CFD1_SCHJY Probable cytosolic Fe-S cluster as...2002.8     33.5     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
866Q9JJ66    499   CDC20_MOUSE Cell division cycle protein 20 ho...3346.1     32.3     16     35GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; IDA:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; IDA:UniProtKB.::GO:0040020; P:regulation of meiosis; IGI:MGI.
867Q6FJ73    337   CIAO1_CANGA Probable cytosolic iron-sulfur pr...328.2     32     34     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
868P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...1343.1     33.5     25     42GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
869Q62623    499   CDC20_RAT Cell division cycle protein 20 homo...910.14     37.7     25     49GO:0005813; C:centrosome; IDA:RGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; IMP:RGD.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.::GO:0050773; P:regulation of dendrite development; IMP:RGD.
870Q8SRB0    334   GBLP_ENCCU Guanine nucleotide-binding protein...2500.14     37.4     18     38
871O13923    601   CORO_SCHPO Coronin-like protein crn1 OS=Schiz...730.14     37.7     26     44GO:0030479; C:actin cortical patch; IDA:PomBase.::GO:0005826; C:actomyosin contractile ring; IDA:PomBase.::GO:0005885; C:Arp2/3 protein complex; ISS:RefGenome.::GO:0051286; C:cell tip; IDA:PomBase.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0051666; P:actin cortical patch localization; ISS:RefGenome.::GO:0051017; P:actin filament bundle assembly; TAS:PomBase.::GO:0030041; P:actin filament polymerization; NAS:PomBase.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; ISS:RefGenome.
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