Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781Q54J37    827   STRN_DICDI Striatin homolog OS=Dictyostelium ...640.64     35.8     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
782Q9D0I6    474   WSDU1_MOUSE WD repeat, SAM and U-box domain-c...1840.7     35.4     22     40GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
783P40042    185   RRT13_YEAST Regulator of rDNA transcription p...590.036     38.5     34     53
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
784Q6FXI8    419   HAT2_CANGA Histone acetyltransferase type B s...2130.036     39.3     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
785Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...942.4     33.9     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
786Q8IV35    697   WDR49_HUMAN WD repeat-containing protein 49 O...840.037     39.7     30     49
787Q7T0W1    728   BOP1A_XENLA Ribosome biogenesis protein bop1-...750.037     39.7     32     52GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
788Q2U5Z8    650   MDV1_ASPOR Mitochondrial division protein 1 O...439.4     32     33     58GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
789Q9P4X3    520   UTP7_SCHPO Probable U3 small nucleolar RNA-as...810.04     39.3     25     49GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
790A2QPW4    412   CIAO1_ASPNC Probable cytosolic iron-sulfur pr...870.042     39.3     30     47
791P73594    326   Y1409_SYNY3 Uncharacterized WD repeat-contain...3370.042     38.9     20     42GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
792Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...2150.12     37.7     22     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
793Q6CU55    439   LIS1_KLULA Nuclear distribution protein PAC1 ...745.8     32.3     31     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
794B5DHW4    1064   WDY_DROPS WD repeat-containing protein on Y c...890.046     39.3     28     49
GO:0005509; F:calcium ion binding; IEA:InterPro.
795Q149M9    1564   NWD1_HUMAN NACHT and WD repeat domain-contain...901.4     34.7     32     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
796Q54IY5    1276   GEMI5_DICDI Component of gems protein 5 OS=Di...830.046     39.3     27     52GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
797Q4R4I8    906   COPB2_MACFA Coatomer subunit beta' OS=Macaca ...790.9     35.4     28     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
798Q05BV3    1969   EMAL5_HUMAN Echinoderm microtubule-associated...2209.4     32     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
799P57737    925   CORO7_HUMAN Coronin-7 OS=Homo sapiens (Human)...1640.047     39.3     22     41GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
800Q9C1X0    297   YN55_SCHPO Uncharacterized WD repeat-containi...771.3     34.3     29     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
801O16519    620   GAD1_CAEEL Gastrulation defective protein 1 O...391.5     34.7     33     59
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042074; P:cell migration involved in gastrulation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:WormBase.
802B4GQJ7    1065   WDY_DROPE WD repeat-containing protein on Y c...890.049     39.3     28     49
GO:0005509; F:calcium ion binding; IEA:InterPro.
803Q5M7T1    339   CIAO1_RAT Probable cytosolic iron-sulfur prot...831.7     33.9     28     49GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
804Q6ZMY6    472   WDR88_HUMAN WD repeat-containing protein 88 O...3330.058     38.9     19     38
805P35605    906   COPB2_BOVIN Coatomer subunit beta' OS=Bos tau...790.94     35     28     44GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.
GO:0005080; F:protein kinase C binding; ISS:AgBase.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; TAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
806P35606    906   COPB2_HUMAN Coatomer subunit beta' OS=Homo sa...860.92     35.4     27     44GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
807C4YPI7    486   LIS1_CANAW Nuclear distribution protein PAC1 ...870.053     38.9     28     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
808Q5A7Q6    486   LIS1_CANAL Nuclear distribution protein PAC1 ...870.053     38.9     28     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
809Q94AD8    539   FBW3_ARATH F-box/WD-40 repeat-containing prot...2130.054     38.9     22     42
GO:0016036; P:cellular response to phosphate starvation; IMP:TAIR.
810O55029    905   COPB2_MOUSE Coatomer subunit beta' OS=Mus mus...860.97     35     27     44
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
811Q5R664    906   COPB2_PONAB Coatomer subunit beta' OS=Pongo a...790.98     35     28     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
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