Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...790.26     37     32     49GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
752Q05583    330   CIAO1_YEAST Cytosolic iron-sulfur protein ass...790.02     40     32     52GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
753A6ZYM0    330   CIAO1_YEAS7 Probable cytosolic iron-sulfur pr...790.021     40     32     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
754Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...681.8     34.3     34     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
755O14053    902   YC47_SCHPO Uncharacterized WD repeat-containi...960.022     40.4     24     43GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; NAS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
756Q4I7X1    612   PFS2_GIBZE Polyadenylation factor subunit 2 O...782.4     33.9     31     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
757Q8WQ85    1704   VILD_DICDI Villidin OS=Dictyostelium discoide...1540.023     40.4     27     44GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.::GO:0005543; F:phospholipid binding; IEA:InterPro.
GO:0007010; P:cytoskeleton organization; IEA:InterPro.::GO:0030835; P:negative regulation of actin filament depolymerization; IBA:RefGenome.::GO:0051707; P:response to other organism; TAS:dictyBase.
758P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...982     34.3     26     43GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
759A1CQL6    453   CIAO1_ASPCL Probable cytosolic iron-sulfur pr...860.024     40     30     47
760A1D3I2    462   CIAO1_NEOFI Probable cytosolic iron-sulfur pr...870.024     40     31     47
761Q6ED65    1977   EMAL5_RAT Echinoderm microtubule-associated p...2754.9     33.1     22     37GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
762Q86HX1    1114   HIRA_DICDI Protein HIRA OS=Dictyostelium disc...850.11     38.1     28     47GO:0005634; C:nucleus; ISS:dictyBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; ISS:dictyBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
763Q24246    663   DYIN_DROME Cytoplasmic dynein 1 intermediate ...1880.026     40     23     42GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0045503; F:dynein light chain binding; IPI:FlyBase.::GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0008088; P:axon cargo transport; IMP:FlyBase.::GO:0051642; P:centrosome localization; IMP:FlyBase.::GO:0016482; P:cytoplasmic transport; IMP:FlyBase.::GO:0001754; P:eye photoreceptor cell differentiation; IGI:FlyBase.::GO:0007291; P:sperm individualization; IMP:FlyBase.::GO:0007051; P:spindle organization; IMP:FlyBase.
764Q28DT7    438   EED_XENTR Polycomb protein eed OS=Xenopus tro...880.026     40     28     56GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
765Q8UUP2    438   EEDA_XENLA Polycomb protein eed-A OS=Xenopus ...890.026     40     28     56GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
766Q921E6    441   EED_MOUSE Polycomb protein EED OS=Mus musculu...910.026     40     27     56GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.::GO:0045120; C:pronucleus; IDA:MGI.::GO:0001739; C:sex chromatin; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.
GO:0006349; P:regulation of gene expression by genetic imprinting; IMP:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
767O75530    441   EED_HUMAN Polycomb protein EED OS=Homo sapien...910.026     40     27     56GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.
GO:0042054; F:histone methyltransferase activity; IDA:MGI.::GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
768Q3SZ25    441   EED_BOVIN Polycomb protein EED OS=Bos taurus ...910.026     40     27     56GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
769O16023    428   ESC_MUSDO Polycomb protein esc OS=Musca domes...780.026     40     28     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
770Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...787.6     32.3     22     42GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
771Q6CB13    565   MDV1_YARLI Mitochondrial division protein 1 O...800.87     35     25     46GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
772Q10272    446   IPI3_SCHPO Pre-rRNA-processing protein crb3/i...1030.028     39.7     25     45GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
773A9UZS7    799   BOP1_MONBE Ribosome biogenesis protein BOP1 h...540.028     40     33     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
774Q75BY3    425   PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS...1019.6     32     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
775A8XYW9    671   BOP1_CAEBR Ribosome biogenesis protein BOP1 h...1590.028     40     23     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
776Q6AZS2    438   EEDB_XENLA Polycomb protein eed-B OS=Xenopus ...880.028     39.7     28     56GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
777Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...2120.49     36.2     23     36GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
778A7RWD2    327   CIAO1_NEMVE Probable cytosolic iron-sulfur pr...830.34     36.2     29     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
779Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...1320.03     40     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
780C5MJE8    490   LIS1_CANTT Nuclear distribution protein PAC1 ...900.46     36.2     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
781Q54J37    827   STRN_DICDI Striatin homolog OS=Dictyostelium ...640.64     35.8     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
records
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