Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...940.41     36.2     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
722Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...761.6     34.7     29     47GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
723O08653    2629   TEP1_RAT Telomerase protein component 1 OS=Ra...1520.013     41.2     25     41GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
724B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...1816.2     32.3     20     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
725Q5BDJ5    446   CIAO1_EMENI Probable cytosolic iron-sulfur pr...870.014     40.8     31     49
726B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...1815.7     32.3     20     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
727Q9BQ67    446   GRWD1_HUMAN Glutamate-rich WD repeat-containi...1070.014     40.8     29     48GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
728Q8NA23    367   WDR31_HUMAN WD repeat-containing protein 31 O...850.014     40.4     32     47
729A3LNI7    524   LIS1_PICST Nuclear distribution protein PAC1 ...1113.8     33.1     26     36GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
730Q8BX09    538   RBBP5_MOUSE Retinoblastoma-binding protein 5 ...1630.015     40.8     22     40GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; ISS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
731B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...310.57     35.4     52     68
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
732P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...585.1     32.7     26     45GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
733Q6BUA6    529   LIS1_DEBHA Nuclear distribution protein PAC1 ...870.021     40.4     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
734P97499    2629   TEP1_MOUSE Telomerase protein component 1 OS=...720.016     41.2     31     53GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IMP:UniProtKB.
735A6H603    1563   NWD1_MOUSE NACHT and WD repeat domain-contain...885.7     32.7     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
736Q803V5    326   LST8_DANRE Target of rapamycin complex subuni...890.016     40.4     28     47GO:0005737; C:cytoplasm; ISS:UniProtKB.
737A5DJX5    507   LIS1_PICGU Nuclear distribution protein PAC1 ...670.69     35.4     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
738B3RNR8    313   CIAO1_TRIAD Probable cytosolic iron-sulfur pr...800.017     40.4     30     50
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
739B7FF09    1089   WDY_DROWI WD repeat-containing protein on Y c...1223.3     33.5     27     39
GO:0005509; F:calcium ion binding; IEA:InterPro.
740Q5ZKH3    446   EED_CHICK Polycomb protein EED OS=Gallus gall...930.017     40.4     27     56GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
741Q92636    917   FAN_HUMAN Protein FAN OS=Homo sapiens (Human)...1881.1     35     21     43GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005625; C:soluble fraction; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005057; F:receptor signaling protein activity; TAS:ProtInc.
GO:0006672; P:ceramide metabolic process; TAS:ProtInc.
742Q0CQ54    999   HIR1_ASPTN Protein hir1 OS=Aspergillus terreu...2270.017     40.8     23     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
743Q9C827    926   COB22_ARATH Coatomer subunit beta'-2 OS=Arabi...2145.4     32.7     22     38GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
744Q0CCS0    422   CIAO1_ASPTN Probable cytosolic iron-sulfur pr...870.018     40.4     31     49
745B0FXQ5    1064   WDY_DROAN WD repeat-containing protein on Y c...890.019     40.8     30     49
GO:0005509; F:calcium ion binding; IEA:InterPro.
746Q4WTL0    460   CIAO1_ASPFU Probable cytosolic iron-sulfur pr...870.019     40.4     31     47
747B0XQ15    460   CIAO1_ASPFC Probable cytosolic iron-sulfur pr...870.019     40.4     31     47
748B7FF06    1171   WDY_DROGR WD repeat-containing protein on Y c...890.019     40.8     30     51
GO:0005509; F:calcium ion binding; IEA:InterPro.
749Q2UPI0    438   CIAO1_ASPOR Probable cytosolic iron-sulfur pr...870.019     40.4     31     47
750B8MWR8    438   CIAO1_ASPFN Probable cytosolic iron-sulfur pr...870.019     40.4     31     47
751Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...790.26     37     32     49GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
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