Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
691Q9DCJ1    326   LST8_MOUSE Target of rapamycin complex subuni...890.008     41.2     26     45
GO:0030838; P:positive regulation of actin filament polymerization; IMP:MGI.::GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IMP:MGI.::GO:0032314; P:regulation of Rac GTPase activity; IMP:MGI.
692B3MET8    667   WDR48_DROAN WD repeat-containing protein 48 h...1580.36     36.6     19     42
693B6H7A3    455   CIAO1_PENCW Probable cytosolic iron-sulfur pr...870.008     41.6     32     51
694Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...1130.009     41.6     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
695B4J8H6    667   WDR48_DROGR WD repeat-containing protein 48 h...1580.58     35.8     19     42
696A2QCU8    670   SCONB_ASPNC Probable E3 ubiquitin ligase comp...753.9     33.1     28     47
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
697Q9HC35    981   EMAL4_HUMAN Echinoderm microtubule-associated...880.12     38.1     32     51GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0007017; P:microtubule-based process; NAS:UniProtKB.::GO:0007067; P:mitosis; NAS:UniProtKB.
698Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...817.5     32     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
699Q7S7L4    486   LIS12_NEUCR Nuclear distribution protein pac1...1621.5     34.3     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
700A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...800.038     39.7     30     48GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
701B4F7L9    1069   WDY_DROME WD repeat-containing protein on Y c...890.01     41.6     31     49
GO:0005509; F:calcium ion binding; IEA:InterPro.
702Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...2220.051     38.9     25     39
703B4MFM2    667   WDR48_DROVI WD repeat-containing protein 48 h...1580.59     35.8     19     42
704Q9FUY2    931   LEUNG_ARATH Transcriptional corepressor LEUNI...1040.31     37     26     44GO:0005634; C:nucleus; IDA:TAIR.
GO:0046982; F:protein heterodimerization activity; IPI:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IMP:TAIR.::GO:0080001; P:mucilage extrusion from seed coat; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
705B4KRQ4    679   WDR48_DROMO WD repeat-containing protein 48 h...1580.54     35.8     19     42
706D1ZEM6    486   LIS12_SORMK Nuclear distribution protein PAC1...1611.5     34.3     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
707Q0CJD8    654   MDV1_ASPTN Mitochondrial division protein 1 O...1590.021     40.4     26     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
708Q6CXX3    861   HIR1_KLULA Protein HIR1 OS=1267 / NRRL Y-1140...2370.011     41.6     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
709Q810D6    446   GRWD1_MOUSE Glutamate-rich WD repeat-containi...1070.011     41.2     30     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
710B7FF12    1068   WDY_DROYA WD repeat-containing protein on Y c...890.011     41.6     31     49
GO:0005509; F:calcium ion binding; IEA:InterPro.
711Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...2561.8     34.3     19     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
712Q1DIW7    668   MDV1_COCIM Mitochondrial division protein 1 O...800.09     38.5     29     48GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
713B7FF08    1182   WDY_DROVI WD repeat-containing protein on Y c...890.012     41.2     30     52
GO:0005509; F:calcium ion binding; IEA:InterPro.
714Q6FWT9    467   LIS1_CANGA Nuclear distribution protein PAC1 ...460.13     37.7     41     54GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
715P58405    794   STRN3_RAT Striatin-3 OS=Rattus norvegicus (Ra...2690.012     41.2     21     36GO:0030425; C:dendrite; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; IDA:RGD.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; IMP:RGD.::GO:0032355; P:response to estradiol stimulus; IDA:RGD.
716Q6P6T4    649   EMAL2_RAT Echinoderm microtubule-associated p...912.3     33.9     32     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0008022; F:protein C-terminus binding; IDA:RGD.::GO:0005102; F:receptor binding; IDA:RGD.
717B7FF07    1217   WDY_DROMO WD repeat-containing protein on Y c...890.013     41.2     30     52
GO:0005509; F:calcium ion binding; IEA:InterPro.
718A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...882.9     33.5     30     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
719Q15291    538   RBBP5_HUMAN Retinoblastoma-binding protein 5 ...1630.013     40.8     22     40GO:0071339; C:MLL1 complex; IDA:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; IDA:UniProtKB.
GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0051568; P:histone H3-K4 methylation; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0043627; P:response to estrogen stimulus; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
720Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...940.41     36.2     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
721Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...940.41     36.2     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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