Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q62871    638   DC1I2_RAT Cytoplasmic dynein 1 intermediate c...1920.006     42     24     41GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0007018; P:microtubule-based movement; TAS:RGD.::GO:0006810; P:transport; IEA:UniProtKB-KW.
662Q2TAF3    927   EMAL4_XENLA Echinoderm microtubule-associated...880.5     36.2     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
663Q42384    486   PRL1_ARATH Protein pleiotropic regulatory loc...370.1     38.1     43     65GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048825; P:cotyledon development; IMP:TAIR.::GO:0009870; P:defense response signaling pathway, resistance gene-dependent; IMP:TAIR.::GO:0010204; P:defense response signaling pathway, resistance gene-independent; IMP:TAIR.::GO:0042742; P:defense response to bacterium; IMP:TAIR.::GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0009755; P:hormone-mediated signaling pathway; IMP:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0006508; P:proteolysis; IMP:TAIR.::GO:0009749; P:response to glucose stimulus; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
664P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...2280.008     41.6     25     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
665Q5R8K2    431   CSTF1_PONAB Cleavage stimulation factor subun...941     35     24     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
666Q80ZK9    677   WDTC1_MOUSE WD and tetratricopeptide repeats ...1370.006     42     26     50GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0004857; F:enzyme inhibitor activity; IDA:MGI.::GO:0042393; F:histone binding; IPI:MGI.::GO:0042826; F:histone deacetylase binding; IPI:MGI.
GO:0055082; P:cellular chemical homeostasis; IMP:MGI.::GO:0032869; P:cellular response to insulin stimulus; IMP:MGI.::GO:0006006; P:glucose metabolic process; IMP:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0035264; P:multicellular organism growth; IMP:MGI.::GO:0045717; P:negative regulation of fatty acid biosynthetic process; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0008361; P:regulation of cell size; IMP:MGI.
667Q2KJH4    606   WDR1_BOVIN WD repeat-containing protein 1 OS=...3310.007     42     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
668Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...863.6     33.1     28     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
669A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...2180.017     40.4     24     38
670Q05048    431   CSTF1_HUMAN Cleavage stimulation factor subun...940.28     36.6     26     46GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
671Q9Z2K5    326   LST8_RAT Target of rapamycin complex subunit ...890.007     41.6     26     45GO:0005829; C:cytosol; IDA:RGD.
672B2AEZ5    464   LIS11_PODAN Nuclear distribution protein PAC1...2260.033     39.7     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
673Q28YY2    680   WDR48_DROPS WD repeat-containing protein 48 h...1580.44     36.2     19     42
674B4GIJ0    680   WDR48_DROPE WD repeat-containing protein 48 h...1580.44     36.2     19     42
675B3NSK1    680   WDR48_DROER WD repeat-containing protein 48 h...1580.38     36.6     19     42
676Q70M86    845   STRN_SORMK Striatin Pro11 OS=K-hell). GN=pro1...740.37     36.6     30     49GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:UniProtKB.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IMP:UniProtKB.::GO:0000909; P:sporocarp development involved in sexual reproduction; IMP:UniProtKB.
677Q54R82    942   MKKA_DICDI Mitogen-activated protein kinase k...910.43     36.2     25     45GO:0005938; C:cell cortex; IDA:dictyBase.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004709; F:MAP kinase kinase kinase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0030587; P:sorocarp development; IMP:dictyBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
678Q9ERG2    796   STRN3_MOUSE Striatin-3 OS=Mus musculus (Mouse...2690.008     42     21     36
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
679Q6DIF4    607   WDR1_XENTR WD repeat-containing protein 1 OS=...880.008     41.6     26     49GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
680B4P7H8    680   WDR48_DROYA WD repeat-containing protein 48 h...1580.37     36.6     19     42
681Q6PA72    326   LST8_XENLA Target of rapamycin complex subuni...890.008     41.2     28     47GO:0005737; C:cytoplasm; ISS:UniProtKB.
682Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...1713.5     33.1     21     38GO:0005737; C:cytoplasm; ISS:UniProtKB.
683Q5I0B4    326   LST8_XENTR Target of rapamycin complex subuni...890.008     41.2     28     47GO:0005737; C:cytoplasm; ISS:UniProtKB.
684A5D7H2    797   STRN3_BOVIN Striatin-3 OS=Bos taurus (Bovine)...2690.008     42     20     36GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
685A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...818.7     32     26     49
686Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...1713.7     33.1     21     38GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
687Q5M9G8    549   DCA11_RAT DDB1- and CUL4-associated factor 11...2380.008     41.6     22     38GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
688Q05AM5    821   ELP2_DANRE Elongator complex protein 2 OS=Dan...860.008     41.6     30     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
689C5FP68    674   SCONB_ARTOC Probable E3 ubiquitin ligase comp...780.18     37.4     31     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
690Q6BYU4    985   HIR1_DEBHA Protein HIR1 OS=0083 / IGC 2968) (...750.008     42     27     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
691Q9DCJ1    326   LST8_MOUSE Target of rapamycin complex subuni...890.008     41.2     26     45
GO:0030838; P:positive regulation of actin filament polymerization; IMP:MGI.::GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IMP:MGI.::GO:0032314; P:regulation of Rac GTPase activity; IMP:MGI.
records
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