Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR146C
Length:
347
Number of sequences:
5887
Description:
YMR146C TIF34 SGDID:S000004754, Chr XIII from 558524-557481, Genome Release 64-1-1, reverse complement, Verified ORF, "eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for translation; stimulates rate of ribosomal scanning during translation reinitiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631A8XSW2    691   WDR48_CAEBR WD repeat-containing protein 48 h...1040.13     38.1     27     46
632Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...820.22     37     22     45GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
633Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...820.22     37     22     45GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
634P18851    423   GBB_YEAST Guanine nucleotide-binding protein ...670.004     42.7     31     51GO:0005834; C:heterotrimeric G-protein complex; IDA:SGD.::GO:0005937; C:mating projection; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IMP:SGD.
GO:0031684; P:heterotrimeric G-protein complex cycle; IMP:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:SGD.::GO:0000750; P:pheromone-dependent signal transduction involved in conjugation with cellular fusion; IGI:SGD.::GO:0010525; P:regulation of transposition, RNA-mediated; IMP:SGD.
635Q6DDF0    495   WDR37_XENLA WD repeat-containing protein 37 O...1140.005     42.4     29     50
636O93277    609   WDR1_CHICK WD repeat-containing protein 1 OS=...3460.004     42.7     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
637Q6CJ50    705   MDV1_KLULA Mitochondrial division protein 1 O...511.5     34.7     35     57GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
638Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...795.4     32.7     27     46GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
639B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...708.8     32     26     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
640Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...709.3     31.6     26     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
641Q4WVS4    658   MDV1_ASPFU Mitochondrial division protein 1 O...454.4     33.1     27     58GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
642Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...800.053     38.9     33     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
643B4LKS9    780   BOP1_DROVI Ribosome biogenesis protein BOP1 h...630.004     42.7     32     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
644Q9Y2I8    494   WDR37_HUMAN WD repeat-containing protein 37 O...1140.039     39.3     27     49
645Q5ACW8    853   HIR1_CANAL Protein HIR1 OS=Candida albicans (...2230.004     42.7     22     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
646Q55FJ2    766   WDR91_DICDI WD repeat-containing protein 91 h...3260.004     42.7     22     40
647Q21624    607   CORO_CAEEL Coronin-like protein cor-1 OS=Caen...860.004     42.4     27     50GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0007126; P:meiosis; IMP:WormBase.
648D4AM37    663   SCONB_ARTBC Probable E3 ubiquitin ligase comp...650.58     35.8     29     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
649D4D8P3    663   SCONB_TRIVH Probable E3 ubiquitin ligase comp...650.57     35.8     29     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
650B6QC06    452   LIS12_PENMQ Nuclear distribution protein nudF...2100.14     37.7     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
651Q5XI13    445   GRWD1_RAT Glutamate-rich WD repeat-containing...1070.004     42.4     31     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
652P25387    318   GBLP_CHLRE Guanine nucleotide-binding protein...1020.25     36.6     29     43
653O14186    846   YDSB_SCHPO Uncharacterized WD repeat-containi...1680.004     42.7     26     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005778; C:peroxisomal membrane; NAS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
654B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...1230.021     40     28     46
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
655Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...1950.005     42     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
656Q6CKE8    434   PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS...2090.34     36.2     21     34GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
657Q8N5D0    677   WDTC1_HUMAN WD and tetratricopeptide repeats ...1370.005     42.4     26     50GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:DFLAT.
658A6RT32    436   CIAO1_BOTFB Probable cytosolic iron-sulfur pr...1540.005     42     27     42
659Q1LZ08    668   WDR48_DROME WD repeat-containing protein 48 h...1580.36     36.6     19     42
660O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...3470.006     42     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
661Q62871    638   DC1I2_RAT Cytoplasmic dynein 1 intermediate c...1920.006     42     24     41GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0007018; P:microtubule-based movement; TAS:RGD.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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